RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PCDHGB5Q9Y5G0 923 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 PCDHGA2Q9Y5H1 932 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 OR6C74A6NCV1 312 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 TXNL1O43396 289 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 CYP11A1P05108 521 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 EIF2S1P05198 315 aaKnown RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 OR52Z1P0C646 297 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 CYP2C9P11712 490 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ATP4AP20648 1035 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ELOAQ14241 798 aaKnown RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 KLHL38Q2WGJ6 581 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 CYP27C1Q4G0S4 372 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 SPDYAQ5MJ70 313 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 C2CD5Q86YS7 1000 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF444Q8N0Y2 327 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 GPKOWQ92917 476 aaPredicted RBP eCLIP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 NOX5Q96PH1 765 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 RMDN3Q96TC7 470 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 DDX23Q9BUQ8 820 aaKnown RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 C6orf50Q9HD87 102 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 RABGEF1Q9UJ41 708 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 RAD51BO15315 384 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 MEFVO15553 781 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 PRPF6O94906 941 aaKnown RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 FKBP9O95302 570 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 TRIM16O95361 564 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 NPTXRO95502 500 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 CTSHP09668 335 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 MYL4P12829 197 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 TBXAS1P24557 533 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 MAGEA1P43355 309 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 SLC26A5P58743 744 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 C2orf54Q08AI8 447 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 NONOQ15233 471 aaKnown RBP eCLIP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 TMEM266Q2M3C6 531 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 SBK1Q52WX2 424 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 GLE1Q53GS7 698 aaKnown RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 PM20D1Q6GTS8 502 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 TYW1BQ6NUM6 668 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 C3orf62Q6ZUJ4 267 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 SV2BQ7L1I2 683 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 GPR142Q7Z601 462 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 IFT20Q8IY31 132 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ANKS1AQ92625 1134 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 TUBGCP3Q96CW5 907 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 NDNQ99608 321 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 BCL7BQ9BQE9 202 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 PITHD1Q9GZP4 211 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ALG2Q9H553 416 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 DCP1AQ9NPI6 582 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 AGPAT5Q9NUQ2 364 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 SIRPGQ9P1W8 387 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 LRWD1Q9UFC0 647 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 A0A1B0GVC2 190 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ABHD14A-ACY1A0A1B0GW23 586 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 GLAP06280 429 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ASGR1P07306 291 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ATF6P18850 670 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 PLCG1P19174 1290 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ATP5F1P24539 256 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 HMOX2P30519 316 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 NPTX2P47972 431 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 DIO1P49895 249 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 NAPAP54920 295 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 CYP27A1Q02318 531 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 TBL3Q12788 808 aaKnown RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 CDC16Q13042 620 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 BLMHQ13867 455 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 SCARB2Q14108 478 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 NCF4Q15080 339 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 IL17AQ16552 155 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 AAGABQ6PD74 315 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 C7orf31Q8N865 590 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 DAGLBQ8NCG7 672 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 HGH1Q9BTY7 390 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 TRIM55Q9BYV6 548 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 LACRTQ9GZZ8 138 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 DENND2DQ9H6A0 471 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF408Q9H9D4 720 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 RPRD1BQ9NQG5 326 aaKnown RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 PAQR5Q9NXK6 330 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 PCDHA13Q9Y5I0 950 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 SESN1Q9Y6P5 492 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 CAPN7Q9Y6W3 813 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 PRUNE2Q8WUY3 3088 aa6.87□□□□□ -1.31
TM9SF4-202ENST00000398022 ACOD1A6NK06 481 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 PRKAR1AP10644 381 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 FGFR4P22455 802 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 PCP4P48539 62 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 DGKGP49619 791 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ARSDP51689 593 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF280AP59817 542 aaPredicted RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 STILQ15468 1287 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 MAN2A1Q16706 1144 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 TDRD12Q587J7 1177 aaKnown RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 IL23RQ5VWK5 629 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ERICH1Q86X53 443 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 OR6S1Q8NH40 331 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 OR8K3Q8NH51 312 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms