RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 AP4E1Q9UPM8 1137 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 NR2E1Q9Y466 385 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 NR2E3Q9Y5X4 410 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 C4AP0C0L4 1744 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 GAS2O43903 313 aaKnown RBP11.63□□□□□ -0.55
IFT140-202ENST00000397417 AOC2O75106 756 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 GZMAP12544 262 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 SP3Q02447 781 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 ZPBP2Q6X784 338 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 USP6NLQ92738 828 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 HACD3Q9P035 362 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 CPSF2Q9P2I0 782 aaKnown RBP11.63□□□□□ -0.55
IFT140-202ENST00000397417 CTNNAL1Q9UBT7 734 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 DIS3Q9Y2L1 958 aaKnown RBP11.63□□□□□ -0.55
IFT140-202ENST00000397417 ANGPTL3Q9Y5C1 460 aa11.63□□□□□ -0.55
IFT140-202ENST00000397417 MYO5AQ9Y4I1 1855 aaKnown RBP11.63□□□□□ -0.55
IFT140-202ENST00000397417 MYH6P13533 1939 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 COL18A1P39060 1754 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 A0A087WUV0 522 aaPredicted RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 ARHGEF37A1IGU5 675 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 TRDMT1O14717 391 aaKnown RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 HSPA4LO95757 839 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 MT-CO1P00395 513 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 GLRBP48167 497 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 VEPH1Q14D04 833 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 TAF5Q15542 800 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 MTHFD1LQ6UB35 978 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 JOSD2Q8TAC2 188 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 BARX2Q9UMQ3 279 aaPredicted RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 GTPBP10A4D1E9 387 aaKnown RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 GMNCA6NCL1 334 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 HCRTO43612 131 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 CFHP08603 1231 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 FECHP22830 423 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 AVPR1AP37288 418 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 MAGEA9P43362 315 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 RPL21P46778 160 aaKnown RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 PTENP60484 403 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 TMTC4Q5T4D3 741 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 SPOCD1Q6ZMY3 1216 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 BZW1Q7L1Q6 419 aaKnown RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 TMC7Q7Z402 723 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 MMGT1Q8N4V1 131 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 CD99L2Q8TCZ2 262 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 CCHCR1Q8TD31 782 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 FBXO32Q969P5 355 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 GCNAQ96QF7 691 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 APOL5Q9BWW9 433 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 ULBP1Q9BZM6 244 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 MUC3BQ9H195 1237 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 ISCUQ9H1K1 167 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 CDC42EP4Q9H3Q1 356 aaKnown RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 DOT1LQ8TEK3 1739 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 A6NNZ2 444 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 MUTP22033 750 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 SERPINB6P35237 376 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 CPA2P48052 419 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 TAS2R40P59535 323 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 YWHAHQ04917 246 aaPredicted RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 TUBB8Q3ZCM7 444 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 ZC3H12AQ5D1E8 599 aaKnown RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 TFDP3Q5H9I0 405 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 HGSNATQ68CP4 663 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 IQSEC1Q6DN90 963 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 TRIM67Q6ZTA4 783 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 ATPAF2Q8N5M1 289 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 ASIC4Q96FT7 647 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 YME1L1Q96TA2 773 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 MTG1Q9BT17 334 aaPredicted RBP11.62□□□□□ -0.55
IFT140-202ENST00000397417 SLC38A7Q9NVC3 462 aa11.62□□□□□ -0.55
IFT140-202ENST00000397417 PPP1R37O75864 691 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 KRT38O76015 456 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 SLC39A12Q504Y0 691 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 TMCO4Q5TGY1 634 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 NLRP14Q86W24 1093 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 HELQQ8TDG4 1101 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 UBXN6Q9BZV1 441 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 NPHS2Q9NP85 383 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 SLC12A8A0AV02 714 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 DHX15O43143 795 aaKnown RBP11.61□□□□□ -0.55
IFT140-202ENST00000397417 NRLP54845 237 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 TPD52P55327 224 aaPredicted RBP11.61□□□□□ -0.55
IFT140-202ENST00000397417 GCNT1Q02742 428 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 TCEA2Q15560 299 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 RNF219Q5W0B1 726 aaPredicted RBP11.61□□□□□ -0.55
IFT140-202ENST00000397417 SPRYD7Q5W111 196 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 RASSF3Q86WH2 238 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 NUDCD3Q8IVD9 361 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 CDKL3Q8IVW4 592 aaPredicted RBP11.61□□□□□ -0.55
IFT140-202ENST00000397417 KIF2BQ8N4N8 673 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 PDCD7Q8N8D1 485 aaKnown RBP11.61□□□□□ -0.55
IFT140-202ENST00000397417 SHC3Q92529 594 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 NCAPGQ9BPX3 1015 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 RSAD1Q9HA92 442 aa11.61□□□□□ -0.55
IFT140-202ENST00000397417 HMX1Q9NP08 348 aaPredicted RBP11.61□□□□□ -0.55
IFT140-202ENST00000397417 NUP188Q5SRE5 1749 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms