RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 PDZD3Q86UT5 571 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 C12orf40Q86WS4 652 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 CACTINQ8WUQ7 758 aaKnown RBP16.01■□□□□ 0.15
SEC13-206ENST00000397102 HVCN1Q96D96 273 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 ARHGEF4Q9NR80 690 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 DNAAF2Q9NVR5 837 aaKnown RBP16.01■□□□□ 0.15
SEC13-206ENST00000397102 MAGEC2Q9UBF1 373 aaPredicted RBP16.01■□□□□ 0.15
SEC13-206ENST00000397102 ITGA11Q9UKX5 1188 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 SNX9Q9Y5X1 595 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16■□□□□ 0.15
SEC13-206ENST00000397102 ARHGAP33O14559 1287 aa16■□□□□ 0.15
SEC13-206ENST00000397102 ADH1CP00326 375 aa16■□□□□ 0.15
SEC13-206ENST00000397102 UBA7P41226 1012 aa16■□□□□ 0.15
SEC13-206ENST00000397102 PPP3CCP48454 512 aa16■□□□□ 0.15
SEC13-206ENST00000397102 USP46P62068 366 aa16■□□□□ 0.15
SEC13-206ENST00000397102 KDSRQ06136 332 aa16■□□□□ 0.15
SEC13-206ENST00000397102 ZNF33AQ06730 810 aa16■□□□□ 0.15
SEC13-206ENST00000397102 RHBDF2Q6PJF5 856 aa16■□□□□ 0.15
SEC13-206ENST00000397102 C19orf48Q6RUI8 117 aa16■□□□□ 0.15
SEC13-206ENST00000397102 BRSK2Q8IWQ3 736 aa16■□□□□ 0.15
SEC13-206ENST00000397102 CXorf38Q8TB03 319 aa16■□□□□ 0.15
SEC13-206ENST00000397102 ADAMTS14Q8WXS8 1223 aa16■□□□□ 0.15
SEC13-206ENST00000397102 RAD54LQ92698 747 aa16■□□□□ 0.15
SEC13-206ENST00000397102 TTLL2Q9BWV7 592 aa16■□□□□ 0.15
SEC13-206ENST00000397102 RNF38Q9H0F5 515 aa16■□□□□ 0.15
SEC13-206ENST00000397102 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
SEC13-206ENST00000397102 ZDHHC4Q9NPG8 344 aa16■□□□□ 0.15
SEC13-206ENST00000397102 EHD2Q9NZN4 543 aa16■□□□□ 0.15
SEC13-206ENST00000397102 CPQQ9Y646 472 aa16■□□□□ 0.15
SEC13-206ENST00000397102 PLXNB3Q9ULL4 1909 aa16■□□□□ 0.15
SEC13-206ENST00000397102 ZNF840PA6NDX5 716 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 SEC24BO95487 1268 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 SYPP08247 313 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 ADH5P11766 374 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 PLCG1P19174 1290 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 ANXA13P27216 316 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 GRIK1P39086 918 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 SLC14A1Q13336 389 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 MAPRE1Q15691 268 aaKnown RBP15.99■□□□□ 0.15
SEC13-206ENST00000397102 SOWAHAQ2M3V2 549 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 DPH6Q7L8W6 267 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 ZNF720Q7Z2F6 126 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 TRMT11Q7Z4G4 463 aaKnown RBP15.99■□□□□ 0.15
SEC13-206ENST00000397102 DDX42Q86XP3 938 aaKnown RBP eCLIP15.99■□□□□ 0.15
SEC13-206ENST00000397102 PHTF2Q8N3S3 785 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 CSGALNACT2Q8N6G5 542 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 KCNV2Q8TDN2 545 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 MYLPFQ96A32 169 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 SYT15Q9BQS2 421 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 FAM213AQ9BRX8 229 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 CDH9Q9ULB4 789 aa15.99■□□□□ 0.15
SEC13-206ENST00000397102 A0A1W2PQD8 194 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 TRIM66O15016 1216 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 EIF5BO60841 1220 aaKnown RBP15.98■□□□□ 0.15
SEC13-206ENST00000397102 ATP2C2O75185 946 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 PPP1R37O75864 691 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 LDHAP00338 332 aaKnown RBP15.98■□□□□ 0.15
SEC13-206ENST00000397102 OAS1P00973 400 aaKnown RBP15.98■□□□□ 0.15
SEC13-206ENST00000397102 KRT19P08727 400 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 GABRG2P18507 467 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 BDNFP23560 247 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 RBP5P82980 135 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 TRIP6Q15654 476 aaKnown RBP15.98■□□□□ 0.15
SEC13-206ENST00000397102 COL28A1Q2UY09 1125 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 SCARA3Q6AZY7 606 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 DEFB119Q8N690 84 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 OR2I1PQ8NGU4 316 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 LARP4BQ92615 738 aaKnown RBP15.98■□□□□ 0.15
SEC13-206ENST00000397102 CCDC86Q9H6F5 360 aaKnown RBP15.98■□□□□ 0.15
SEC13-206ENST00000397102 SMPD4Q9NXE4 827 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 RBAKQ9NYW8 714 aaPredicted RBP15.98■□□□□ 0.15
SEC13-206ENST00000397102 CALCOCO1Q9P1Z2 691 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 CFAP97Q9P2B7 532 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 TBC1D14Q9P2M4 693 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 SIX4Q9UIU6 781 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 EXOC7Q9UPT5 735 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 ITPR1Q14643 2758 aa15.98■□□□□ 0.15
SEC13-206ENST00000397102 NBEAQ8NFP9 2946 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 TULP1O00294 542 aaPredicted RBP15.97■□□□□ 0.15
SEC13-206ENST00000397102 SCAMP3O14828 347 aaKnown RBP15.97■□□□□ 0.15
SEC13-206ENST00000397102 SH3BP5O60239 455 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 GJB3O75712 270 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 FTH1P19P0C7X4 201 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 PSMC1P62191 440 aaKnown RBP15.97■□□□□ 0.15
SEC13-206ENST00000397102 NOP14P78316 857 aaKnown RBP15.97■□□□□ 0.15
SEC13-206ENST00000397102 GAD2Q05329 585 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 PREPLQ4J6C6 727 aaPredicted RBP15.97■□□□□ 0.15
SEC13-206ENST00000397102 CCNI2Q6ZMN8 369 aaPredicted RBP15.97■□□□□ 0.15
SEC13-206ENST00000397102 LIMS2Q7Z4I7 341 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 SFR1Q86XK3 245 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 ZNF513Q8N8E2 541 aaPredicted RBP15.97■□□□□ 0.15
SEC13-206ENST00000397102 KRI1Q8N9T8 703 aaKnown RBP15.97■□□□□ 0.15
SEC13-206ENST00000397102 ZSWIM2Q8NEG5 633 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 RASSF8Q8NHQ8 419 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 KBTBD7Q8WVZ9 684 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 OTUB2Q96DC9 234 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 SAAL1Q96ER3 474 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 CAMK1GQ96NX5 476 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 STRA6Q9BX79 667 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms