RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 PFKMP08237 780 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 TXNP10599 105 aaKnown RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 RALAP11233 206 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 GNAT1P11488 350 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 GJA5P36382 358 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 CRYBB1P53674 252 aaPredicted RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 PPP1R7Q15435 360 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 SLC10A6Q3KNW5 377 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 KRT71Q3SY84 523 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 VSTM1Q6UX27 236 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 GALNT7Q86SF2 657 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 TRABD2AQ86V40 505 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 TRIM42Q8IWZ5 723 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 ATP11CQ8NB49 1132 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 MGARPQ8TDB4 240 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 UPF1Q92900 1129 aaKnown RBP eCLIP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 CCDC127Q96BQ5 260 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 ACAP3Q96P50 834 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 OLFM3Q96PB7 478 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 POP1Q99575 1024 aaKnown RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 KIFC3Q9BVG8 833 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 NT5C1AQ9BXI3 368 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 CELF4Q9BZC1 486 aaKnown RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 PTCH2Q9Y6C5 1203 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 GOLGA6L7A0A1B0GV03 622 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 CCDC189A1A4V9 331 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 TMEM150BA6NC51 233 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 E7ENQ6 273 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 GABRDO14764 452 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 XPO1O14980 1071 aaKnown RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 NCAM2O15394 837 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 RASSF9O75901 435 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 DLATP10515 647 aaKnown RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 GCAP28676 217 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 SSTR3P32745 418 aaPredicted RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 STX2P32856 288 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 FDFT1P37268 417 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 SLCO1A2P46721 670 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 GLUD2P49448 558 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 CPT1AP50416 773 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 RAB27AP51159 221 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 ARL4CP56559 192 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 ZNF211Q13398 564 aaPredicted RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 PRKG1Q13976 671 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 SLC29A2Q14542 456 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 SV2CQ496J9 727 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 PTPN20Q4JDL3 420 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 CCDC38Q502W7 563 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 IZUMO3Q5VZ72 239 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 CAPN12Q6ZSI9 719 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 SEPT14Q6ZU15 432 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 ZNF365Q70YC5 407 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 PLEKHH3Q7Z736 793 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 NCAPG2Q86XI2 1143 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 CACNA2D3Q8IZS8 1091 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 RNF149Q8NC42 400 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 QKIQ96PU8 341 aaKnown RBP eCLIP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 C19orf43Q9BQ61 176 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 DDX23Q9BUQ8 820 aaKnown RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 SDCBP2Q9H190 292 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 VPS11Q9H270 941 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 TLE6Q9H808 572 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 SLC38A7Q9NVC3 462 aa6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 PSMC3IPQ9P2W1 217 aaPredicted RBP6.29□□□□□ -1.4
RAPGEF4-203ENST00000397087 ERI2A8K979 691 aaKnown RBP6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 LACTBL1A8MY62 500 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 PSMD3O43242 534 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 TYROBPO43914 113 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 SUN1O94901 812 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 C1QAP02745 245 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 KRT3P12035 628 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 COL6A1P12109 1028 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 SKIP12755 728 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 RPL9P32969 192 aaKnown RBP6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 IFNAR2P48551 515 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 SERPINB9P50453 376 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 BCAT1P54687 386 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 SLC6A3Q01959 620 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 PAFAH1B3Q15102 231 aaKnown RBP6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 MTFR1Q15390 333 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 TBCCQ15814 346 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 PARP6Q2NL67 630 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 RAB41Q5JT25 222 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 TAF2Q6P1X5 1199 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 GADL1Q6ZQY3 521 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 EXOC3L1Q86VI1 746 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 DYDC1Q8WWB3 177 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 INPP5DQ92835 1189 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 SEC16BQ96JE7 1060 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 HNRNPABQ99729 332 aaKnown RBP6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 MTMR12Q9C0I1 747 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 ELOVL4Q9GZR5 314 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 FAM96AQ9H5X1 160 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 TXNRD2Q9NNW7 524 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 ZNF106Q9H2Y7 1883 aaKnown RBP6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 MCM3APO60318 1980 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 CXorf51AA0A1B0GTR3 108 aa6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 MANSC4A6NHS7 340 aaPredicted RBP6.28□□□□□ -1.4
RAPGEF4-203ENST00000397087 TMEM189-UBE2V1I3L0A0 370 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms