RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 ATG2BQ96BY7 2078 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 SPAARA0A1B0GVQ0 90 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 KPNA7A9QM74 516 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 TAF4O00268 1085 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 HYAL3O43820 417 aaPredicted RBP8.62□□□□□ -1.03
NUP98-206ENST00000397013 RHOBTB1O94844 696 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 APBB3O95704 486 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 AVPP01185 164 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 OPRD1P41143 372 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 PRPHP41219 470 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 TAF6P49848 677 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 FAM193AP78312 1265 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 ATP2C1P98194 919 aaPredicted RBP8.62□□□□□ -1.03
NUP98-206ENST00000397013 PDGFRLQ15198 375 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 PTPAQ15257 358 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 ELF2Q15723 593 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 ZNF77Q15935 545 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 PMS2CLQ68D20 193 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 ADALQ6DHV7 355 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 MCTP1Q6DN14 999 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 ANO7Q6IWH7 933 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 CC2D1AQ6P1N0 951 aaPredicted RBP8.62□□□□□ -1.03
NUP98-206ENST00000397013 TMEFF1Q8IYR6 380 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 THEM5Q8N1Q8 247 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 PDCL2Q8N4E4 241 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 MDGA1Q8NFP4 955 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 SPPL2BQ8TCT7 592 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 SH3RF2Q8TEC5 729 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 USP33Q8TEY7 942 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 OSCP1Q8WVF1 389 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 MRPS31Q92665 395 aaKnown RBP8.62□□□□□ -1.03
NUP98-206ENST00000397013 HPS1Q92902 700 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 GATA6Q92908 595 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 CD101Q93033 1021 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 ERLEC1Q96DZ1 483 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 FNBP1Q96RU3 617 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 PKMYT1Q99640 499 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 KIF2CQ99661 725 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 LLPHQ9BRT6 129 aaKnown RBP8.62□□□□□ -1.03
NUP98-206ENST00000397013 RAB34Q9BZG1 259 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 GCNT4Q9P109 453 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 HSFX1Q9UBD0 423 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 MBD1Q9UIS9 605 aaPredicted RBP8.62□□□□□ -1.03
NUP98-206ENST00000397013 KLK13Q9UKR3 277 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 PCDHB5Q9Y5E4 795 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 HRH3Q9Y5N1 445 aa8.62□□□□□ -1.03
NUP98-206ENST00000397013 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 KHNYNO15037 678 aaKnown RBP8.61□□□□□ -1.03
NUP98-206ENST00000397013 XPOTO43592 962 aaKnown RBP8.61□□□□□ -1.03
NUP98-206ENST00000397013 NOL4O94818 638 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 FAM13AO94988 1023 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 PLCG1P19174 1290 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 LMO2P25791 158 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 PTGER3P43115 390 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 MAPK8P45983 427 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 DHPSP49366 369 aaPredicted RBP8.61□□□□□ -1.03
NUP98-206ENST00000397013 ZNF131P52739 623 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 GTF2BQ00403 316 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 RING1Q06587 406 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 KARSQ15046 597 aaKnown RBP8.61□□□□□ -1.03
NUP98-206ENST00000397013 USP49Q70CQ1 688 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 SCN4BQ8IWT1 228 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 DCP1BQ8IZD4 617 aaKnown RBP8.61□□□□□ -1.03
NUP98-206ENST00000397013 MEIOBQ8N635 442 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 TSTD1Q8NFU3 115 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 OR2I1PQ8NGU4 316 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 CXorf38Q8TB03 319 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 SAAL1Q96ER3 474 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 RNF38Q9H0F5 515 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 TMEM9BQ9NQ34 198 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 DDX43Q9NXZ2 648 aaKnown RBP8.61□□□□□ -1.03
NUP98-206ENST00000397013 LARSQ9P2J5 1176 aaKnown RBP8.61□□□□□ -1.03
NUP98-206ENST00000397013 AGO2Q9UKV8 859 aaKnown RBP8.61□□□□□ -1.03
NUP98-206ENST00000397013 DSEQ9UL01 958 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 AGAP1Q9UPQ3 857 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 FREM2Q5SZK8 3169 aa8.61□□□□□ -1.03
NUP98-206ENST00000397013 ATXN2Q99700 1313 aaKnown RBP8.6□□□□□ -1.03
NUP98-206ENST00000397013 CELSR3Q9NYQ7 3312 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 GOLGA8IPA6NC78 632 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 GOLGA8JA6NMD2 632 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 SGK1O00141 431 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 LAD1O00515 517 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 CKMP06732 381 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 CSH1P0DML2 217 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 CSH2P0DML3 217 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 CEACAM1P13688 526 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 POLR2BP30876 1174 aaKnown RBP8.6□□□□□ -1.03
NUP98-206ENST00000397013 GPC1P35052 558 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 IFNAR2P48551 515 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 EPHA4P54764 986 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 HMGN5P82970 282 aaKnown RBP8.6□□□□□ -1.03
NUP98-206ENST00000397013 TFAMQ00059 246 aaKnown RBP8.6□□□□□ -1.03
NUP98-206ENST00000397013 FAM160A1Q05DH4 1040 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 CBLBQ13191 982 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 ZNF268Q14587 947 aaPredicted RBP8.6□□□□□ -1.03
NUP98-206ENST00000397013 LAPTM4AQ15012 233 aa8.6□□□□□ -1.03
NUP98-206ENST00000397013 OCLNQ16625 522 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms