RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 AMPD2Q01433 879 aa11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 TCERG1LQ5VWI1 586 aa11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 SPOPLQ6IQ16 392 aa11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 SCARA5Q6ZMJ2 495 aa11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 FAM35AQ86V20 835 aa11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 DUSP9Q99956 384 aaKnown RBP11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 ARHGAP26Q9UNA1 814 aa11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 PIAS3Q9Y6X2 628 aa11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 MIA3Q5JRA6 1907 aa11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 GVINP1Q7Z2Y8 2422 aa11.77□□□□□ -0.53
NDUFA9-202ENST00000396655 CACNA1GO43497 2377 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 TRIM49BA6NDI0 452 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 CLDN5O00501 218 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 AP1G2O75843 785 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 OLFM2O95897 454 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 CKMP06732 381 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 TUBP50607 506 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 CACNA2D1P54289 1103 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 USP46P62068 366 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 SLC7A9P82251 487 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 CETN1Q12798 172 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 PAK1Q13153 545 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 FZD5Q13467 585 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 UBXN2BQ14CS0 331 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 PDGFRLQ15198 375 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 ITPRIPL2Q3MIP1 535 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 ZNF528Q3MIS6 628 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 CBWD6Q4V339 395 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 CBWD3Q5JTY5 395 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 CBWD5Q5RIA9 395 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 ISM2Q6H9L7 571 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 CC2D1AQ6P1N0 951 aaPredicted RBP11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 C1orf210Q8IVY1 113 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 MLKLQ8NB16 471 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 STKLD1Q8NE28 680 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 WHAMMQ8TF30 809 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 NELFBQ8WX92 580 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 FAM3CQ92520 227 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 SEMA4DQ92854 862 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 CYFIP2Q96F07 1278 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 KCNK16Q96T55 309 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 MED10Q9BTT4 135 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 UBXN6Q9BZV1 441 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 FOXQ1Q9C009 403 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 SEMA4AQ9H3S1 761 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 FBXO44Q9H4M3 255 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 GKN1Q9NS71 199 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 TMEM30AQ9NV96 361 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 KIAA1257Q9ULG3 409 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 COL4A2P08572 1712 aa11.76□□□□□ -0.53
NDUFA9-202ENST00000396655 KIF26AQ9ULI4 1882 aaPredicted RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 H0Y858 1186 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 ATMINO43313 823 aaPredicted RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 GFRA3O60609 400 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 OAS1P00973 400 aaKnown RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 DCNP07585 359 aaKnown RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 ZDHHC11BP0C7U3 371 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 TBXAS1P24557 533 aaPredicted RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 NBL1P41271 181 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 FMO5P49326 533 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 KPNA1P52294 538 aaPredicted RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 YWHAEP62258 255 aaKnown RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 TAF10Q12962 218 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 ANGPT1Q15389 498 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 DCAF17Q5H9S7 520 aaPredicted RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 CT47A1Q5JQC4 288 aaPredicted RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 TRIM59Q8IWR1 403 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 SYNPOQ8N3V7 929 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 ZNF276Q8N554 614 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 C12orf29Q8N999 325 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 SLC2A14Q8TDB8 520 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 ATOH1Q92858 354 aaPredicted RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 EXOC4Q96A65 974 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 CYP2S1Q96SQ9 504 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 MMRN2Q9H8L6 949 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 CISHQ9NSE2 258 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 FAM86C1Q9NVL1 165 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 RWDD2AQ9UIY3 292 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 FBXO4Q9UKT5 387 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 CCL26Q9Y258 94 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 MTF2Q9Y483 593 aaPredicted RBP11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 TICRRQ7Z2Z1 1910 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 EPG5Q9HCE0 2579 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 DNAH14Q0VDD8 3507 aa11.75□□□□□ -0.53
NDUFA9-202ENST00000396655 MYH10P35580 1976 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 C2orf78A6NCI8 922 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 SPECC1L-ADORA2AF8WAN1 911 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 BIN1O00499 593 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 CD72P21854 359 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 TARSP26639 723 aaKnown RBP11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 CTHP32929 405 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 SLC5A3P53794 718 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 USP4Q13107 963 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 CUL2Q13617 745 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 RUNX3Q13761 415 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 ZNF77Q15935 545 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 CCDC40Q4G0X9 1142 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 DGKKQ5KSL6 1271 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 KLHL10Q6JEL2 608 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms