RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 DDI1Q8WTU0 396 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 GJA10Q969M2 543 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 VPS39Q96JC1 886 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 HHIPL1Q96JK4 782 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 DACH2Q96NX9 599 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 ERP44Q9BS26 406 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 DEFB129Q9H1M3 183 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 GRID2IPA4D2P6 1211 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 USP17L5A8MUK1 530 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 NFIBO00712 420 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 GNA12Q03113 381 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 TCP10Q12799 353 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 GRB10Q13322 594 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 KCNK18Q7Z418 384 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 CLIP4Q8N3C7 705 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 Q8N9G6 341 aaPredicted RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 TSSK1BQ9BXA7 367 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 SLC13A1Q9BZW2 595 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 LRMDAQ9H2I8 198 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 BRD7Q9NPI1 651 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 ARHGAP20Q9P2F6 1191 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 PCDHB13Q9Y5F0 798 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 FRMPD2Q68DX3 1309 aaPredicted RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 TMEM221A6NGB7 291 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 POTEMA6NI47 508 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 K7EPI3 171 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 PIK3R2O00459 728 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 RNASEH1O60930 286 aaKnown RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 MYO1DO94832 1006 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 TDP2O95551 362 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 MYL2P10916 166 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 DBTP11182 482 aaKnown RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 GSSP48637 474 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 PHC1P78364 1004 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 C10orf76Q5T2E6 689 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 TTC33Q6PID6 262 aaPredicted RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 FBXO46Q6PJ61 603 aaPredicted RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 PIGWQ7Z7B1 504 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 SIX6OS1Q8N1H7 587 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 PIAS4Q8N2W9 510 aaPredicted RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 ZCCHC7Q8N3Z6 543 aaKnown RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 GSTCDQ8NEC7 633 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 RUBCNQ92622 972 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 CFAP36Q96G28 342 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 PNMA5Q96PV4 448 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 HNRNPABQ99729 332 aaKnown RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 ELP3Q9H9T3 547 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 CCDC177Q9NQR7 707 aaPredicted RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 LAD1O00515 517 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 AIM2O14862 343 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 LRRN2O75325 713 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 TNFAIP8O95379 198 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 CCNE1P24864 410 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 NOVP48745 357 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 AQP4P55087 323 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 CDC16Q13042 620 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 MAPK6Q16659 721 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 FOXB2Q5VYV0 432 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 C4orf22Q6V702 233 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 NEK8Q86SG6 692 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 ARID3BQ8IVW6 561 aaPredicted RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 PARP8Q8N3A8 854 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 CYGBQ8WWM9 190 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 C7orf25Q9BPX7 421 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 ADNPQ9H2P0 1102 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 METTL14Q9HCE5 456 aaKnown RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 CD209Q9NNX6 404 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 TYW1Q9NV66 732 aaKnown RBP8.75□□□□□ -1.01
NDE1-202ENST00000396355 SEPT10Q9P0V9 454 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 GABBR1Q9UBS5 961 aa8.75□□□□□ -1.01
NDE1-202ENST00000396355 MANSC4A6NHS7 340 aaPredicted RBP8.74□□□□□ -1.01
NDE1-202ENST00000396355 MYMKA6NI61 221 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 TPPPO94811 219 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 SERPING1P05155 500 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 SLC10A3P09131 477 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 MAN1A1P33908 653 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 CACNB1Q02641 598 aaPredicted RBP8.74□□□□□ -1.01
NDE1-202ENST00000396355 UBE3AQ05086 875 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 BFSP2Q13515 415 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 LAMC2Q13753 1193 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ECM1Q16610 540 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 NDUFA5Q16718 116 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 EDRF1Q3B7T1 1238 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 SNAP47Q5SQN1 464 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 CNNM4Q6P4Q7 775 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 SAMD3Q8N6K7 520 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 NEDD1Q8NHV4 660 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 KRT35Q92764 455 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 COA7Q96BR5 231 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 C18orf8Q96DM3 657 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 MTMR9Q96QG7 549 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 PURBQ96QR8 312 aaKnown RBP8.74□□□□□ -1.01
NDE1-202ENST00000396355 RAB34Q9BZG1 259 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 COA1Q9GZY4 146 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ING2Q9H160 280 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 VTA1Q9NP79 307 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 IPPQ9Y573 584 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ARHGEF37A1IGU5 675 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 PPP1R11O60927 126 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms