RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 PDE4CQ08493 712 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 TEAD2Q15562 447 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 PKDCCQ504Y2 493 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 SLC47A2Q86VL8 602 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 NPAS3Q8IXF0 933 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 SCAMP5Q8TAC9 235 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 ADAMTS19Q8TE59 1207 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 IL37Q9NZH6 218 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 ZFP37Q9Y6Q3 630 aaPredicted RBP20.28■□□□□ 0.84
HOXA9-202ENST00000396345 ZNF638Q14966 1978 aaKnown RBP20.28■□□□□ 0.84
HOXA9-202ENST00000396345 PATJQ8NI35 1801 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 DOCK8Q8NF50 2099 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 C19orf67A6NJJ6 358 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 XPO1O14980 1071 aaKnown RBP20.27■□□□□ 0.84
HOXA9-202ENST00000396345 GFPT2O94808 682 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 LAMP2P13473 410 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 PLCB2Q00722 1185 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 ARHGAP15Q53QZ3 475 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 GPRIN1Q7Z2K8 1008 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 TMEM150AQ86TG1 271 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 PIGZQ86VD9 579 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 PLCD3Q8N3E9 789 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 FBXO32Q969P5 355 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 MCRS1Q96EZ8 462 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 FBXO44Q9H4M3 255 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 GDE1Q9NZC3 331 aa20.27■□□□□ 0.84
HOXA9-202ENST00000396345 TULP2O00295 520 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 CYP4F8P98187 520 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 TAF10Q12962 218 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 MEA1Q16626 185 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 DENND1BQ6P3S1 775 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 ZDHHC14Q8IZN3 488 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 MRPS31Q92665 395 aaKnown RBP20.26■□□□□ 0.83
HOXA9-202ENST00000396345 SECISBP2LQ93073 1101 aaKnown RBP20.26■□□□□ 0.83
HOXA9-202ENST00000396345 SLITRK1Q96PX8 696 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 SLITRK6Q9H5Y7 841 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 TRPM5Q9NZQ8 1165 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 EPS15L1Q9UBC2 864 aa20.26■□□□□ 0.83
HOXA9-202ENST00000396345 TADA3O75528 432 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 CYP11B1P15538 503 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 KRT9P35527 623 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 PLA2G4AP47712 749 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 PPP3CCP48454 512 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 PDE6CP51160 858 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 KIF11P52732 1056 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 STXBP5Q5T5C0 1151 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 GPR158Q5T848 1215 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 SLC35F5Q8WV83 523 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 NECAB3Q96P71 396 aaPredicted RBP20.25■□□□□ 0.83
HOXA9-202ENST00000396345 UHRF1Q96T88 793 aaPredicted RBP20.25■□□□□ 0.83
HOXA9-202ENST00000396345 NUP58Q9BVL2 599 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 PCDHGC3Q9UN70 934 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 DENND4CQ5VZ89 1909 aa20.25■□□□□ 0.83
HOXA9-202ENST00000396345 FAM92AA1XBS5 289 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 CFHP08603 1231 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 DDX6P26196 483 aaKnown RBP eCLIP20.24■□□□□ 0.83
HOXA9-202ENST00000396345 GPD2P43304 727 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 FIGNQ5HY92 759 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 RAB41Q5JT25 222 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 POTEHQ6S545 545 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 SARM1Q6SZW1 724 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 GPIHBP1Q8IV16 184 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 PDZD8Q8NEN9 1154 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 KCTD13Q8WZ19 329 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 OVCA2Q8WZ82 227 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 BAP1Q92560 729 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 ZSWIM3Q96MP5 696 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 EDEM3Q9BZQ6 932 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 TTYH3Q9C0H2 523 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 TASP1Q9H6P5 420 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 LRRC4Q9HBW1 653 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 LIMD1Q9UGP4 676 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 CHORDC1Q9UHD1 332 aaPredicted RBP20.24■□□□□ 0.83
HOXA9-202ENST00000396345 MYO6Q9UM54 1294 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 SCML2Q9UQR0 700 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 OBSL1O75147 1896 aa20.24■□□□□ 0.83
HOXA9-202ENST00000396345 RGS7P49802 495 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 TKTL1P51854 596 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 ARID5AQ03989 594 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 TAF3Q5VWG9 929 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 TXNDC8Q6A555 127 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 PMF1Q6P1K2 205 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 NOP9Q86U38 636 aaKnown RBP20.23■□□□□ 0.83
HOXA9-202ENST00000396345 PASD1Q8IV76 773 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 GJD3Q8N144 294 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 EPS8L1Q8TE68 723 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 IQCDQ96DY2 449 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 LHX5Q9H2C1 402 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 PDCL3Q9H2J4 239 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 TRPC7Q9HCX4 862 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 GMIPQ9P107 970 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 ZMYM5Q9UJ78 669 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 USP3Q9Y6I4 520 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 NCANO14594 1321 aa20.23■□□□□ 0.83
HOXA9-202ENST00000396345 ZNF840PA6NDX5 716 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 SOBPA7XYQ1 873 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 ABL1P00519 1130 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 CCDC172P0C7W6 258 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 MON1AQ86VX9 555 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 ZNF677Q86XU0 584 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms