RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 PGBD4Q96DM1 585 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 PRR11Q96HE9 360 aaPredicted RBP10.09□□□□□ -0.79
CDRT1-204ENST00000395906 CFAP57Q96MR6 1250 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 HIPK3Q9H422 1215 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 FANCEQ9HB96 536 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 KIAA1586Q9HCI6 787 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 ANKMY1Q9P2S6 941 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 PCDHGB4Q9UN71 923 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 INPP5FQ9Y2H2 1132 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 PCDHGB5Q9Y5G0 923 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 AP4B1Q9Y6B7 739 aa10.09□□□□□ -0.79
CDRT1-204ENST00000395906 CHD4Q14839 1912 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 COL1A1P02452 1464 aaPredicted RBP10.08□□□□□ -0.8
CDRT1-204ENST00000395906 SNTNA6NMZ2 147 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 FAM25EA8MYX2 175 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 FCHO1O14526 889 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 DDX3YO15523 660 aaKnown RBP10.08□□□□□ -0.8
CDRT1-204ENST00000395906 GPAA1O43292 621 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 KCNJ13O60928 360 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 GMNNO75496 209 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 NOL4O94818 638 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 CETPP11597 493 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 CPA2P48052 419 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 P2RX3P56373 397 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 DLG4P78352 724 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 RALGDSQ12967 914 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 RAPGEF1Q13905 1077 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 OXA1LQ15070 435 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 AGAP7PQ5VUJ5 663 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 LINC00469Q8N7U9 141 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 FLAD1Q8NFF5 587 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 TNIP2Q8NFZ5 429 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 SLC26A7Q8TE54 656 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 ADAMTS16Q8TE57 1224 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 ZNF384Q8TF68 577 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 COQ7Q99807 217 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 UQCC2Q9BRT2 126 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 MXD3Q9BW11 206 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 CALN1Q9BXU9 219 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 ARMT1Q9H993 441 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 KCNQ5Q9NR82 932 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 FBXO6Q9NRD1 293 aaPredicted RBP10.08□□□□□ -0.8
CDRT1-204ENST00000395906 GPSM3Q9Y4H4 160 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 COL24A1Q17RW2 1714 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 MYOCOSA0A1B0GUC4 107 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 A6NL46 340 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 PSMD12O00232 456 aaPredicted RBP10.08□□□□□ -0.8
CDRT1-204ENST00000395906 SNX2O60749 519 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 MYO1DO94832 1006 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 C8BP07358 591 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 ALOX5P09917 674 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 IL32P24001 234 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 CCNCP24863 283 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 RPA1P27694 616 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 ALDH1A3P47895 512 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 B2MP61769 119 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 SELENBP1Q13228 472 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 DPYSQ14117 519 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 OASLQ15646 514 aaKnown RBP10.08□□□□□ -0.8
CDRT1-204ENST00000395906 INSCQ1MX18 579 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 LSM12Q3MHD2 195 aaKnown RBP10.08□□□□□ -0.8
CDRT1-204ENST00000395906 TMEM67Q5HYA8 995 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 CEP78Q5JTW2 689 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 DCAF12L1Q5VU92 463 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 TRABD2AQ86V40 505 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 DCP2Q8IU60 420 aaKnown RBP10.08□□□□□ -0.8
CDRT1-204ENST00000395906 LURAP1LQ8IV03 231 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 MINDY2Q8NBR6 621 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 MAML1Q92585 1016 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 ISOC1Q96CN7 298 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 WNK4Q96J92 1243 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 RBM15Q96T37 977 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDRT1-204ENST00000395906 AAASQ9NRG9 546 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 DISC1Q9NRI5 854 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 AGO2Q9UKV8 859 aaKnown RBP10.08□□□□□ -0.8
CDRT1-204ENST00000395906 SPEF1Q9Y4P9 236 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
CDRT1-204ENST00000395906 ILVBLA1L0T0 632 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 GOLGA8IPA6NC78 632 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 M0QX08 132 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 PPEF1O14829 653 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 SLC22A1O15245 554 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 THAP12O43422 761 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 UQCRFS1P1P0C7P4 283 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 POLR2MP0CAP2 368 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 PRKCAP17252 672 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 RPL17P18621 184 aaKnown RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 ADD2P35612 726 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 HSPA13P48723 471 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 CASP5P51878 434 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 ZNF200P98182 395 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 ARID5AQ03989 594 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 GALNT1Q10472 559 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 ITGADQ13349 1161 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 STAT4Q14765 748 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 TMED2Q15363 201 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 DLGAP5Q15398 846 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 NFE2Q16621 373 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms