RNA–Protein interactions for RNA: ENST00000395833.7

LMO2-202, Transcript of LIM domain only 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-202ENST00000395833 MARCH5Q9NX47 278 aa30.9■■■□□ 2.54
LMO2-202ENST00000395833 DDX56Q9NY93 547 aaKnown RBP30.9■■■□□ 2.54
LMO2-202ENST00000395833 MTUS1Q9ULD2 1270 aa30.9■■■□□ 2.54
LMO2-202ENST00000395833 DPYSL4O14531 572 aa30.89■■■□□ 2.54
LMO2-202ENST00000395833 TUBBP07437 444 aa30.89■■■□□ 2.54
LMO2-202ENST00000395833 SDC4P31431 198 aa30.89■■■□□ 2.54
LMO2-202ENST00000395833 CETN2P41208 172 aa30.89■■■□□ 2.54
LMO2-202ENST00000395833 RABGGTBP53611 331 aa30.89■■■□□ 2.54
LMO2-202ENST00000395833 FAM171A1Q5VUB5 890 aa30.89■■■□□ 2.54
LMO2-202ENST00000395833 LRRTM3Q86VH5 581 aa30.89■■■□□ 2.54
LMO2-202ENST00000395833 ARFGAP1Q8N6T3 406 aa30.89■■■□□ 2.54
LMO2-202ENST00000395833 KHSRPQ92945 711 aaKnown RBP eCLIP30.89■■■□□ 2.54
LMO2-202ENST00000395833 RBM41Q96IZ5 413 aaKnown RBP30.89■■■□□ 2.54
LMO2-202ENST00000395833 NR2E1Q9Y466 385 aa30.89■■■□□ 2.54
LMO2-202ENST00000395833 ABHD14A-ACY1A0A1B0GW23 586 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 GALTP07902 379 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 CSF2RAP15509 400 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 BDNFP23560 247 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 CACNA2D1P54289 1103 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 SLC7A5Q01650 507 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 CDO1Q16878 200 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 C15orf59Q2T9L4 293 aaPredicted RBP30.88■■■□□ 2.53
LMO2-202ENST00000395833 TXNRD3NBQ6F5E7 133 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 CEP57Q86XR8 500 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 RCOR2Q8IZ40 523 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 RNF25Q96BH1 459 aaPredicted RBP30.88■■■□□ 2.53
LMO2-202ENST00000395833 CFAP57Q96MR6 1250 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 RAB21Q9UL25 225 aa30.88■■■□□ 2.53
LMO2-202ENST00000395833 FNDC1Q4ZHG4 1894 aaPredicted RBP30.88■■■□□ 2.53
LMO2-202ENST00000395833 NT5C1B-RDH14C9J2C7 533 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 OAZ2O95190 189 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 KRT7P08729 469 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 TKTL1P51854 596 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 VSNL1P62760 191 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 SLC25A11Q02978 314 aaKnown RBP30.87■■■□□ 2.53
LMO2-202ENST00000395833 CCDC14Q49A88 953 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 EFHC1Q5JVL4 640 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 VARS2Q5ST30 1063 aaKnown RBP30.87■■■□□ 2.53
LMO2-202ENST00000395833 POLNQ7Z5Q5 900 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 SPATA2LQ8IUW3 424 aaPredicted RBP30.87■■■□□ 2.53
LMO2-202ENST00000395833 ZMIZ2Q8NF64 920 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 HDAC7Q8WUI4 952 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 ACSF2Q96CM8 615 aaPredicted RBP30.87■■■□□ 2.53
LMO2-202ENST00000395833 KCNK16Q96T55 309 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 PCSK1NQ9UHG2 260 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 SF3B1O75533 1304 aaKnown RBP eCLIP30.87■■■□□ 2.535e-7■■■■■ 65.1
LMO2-202ENST00000395833 TCRBV7S2A1N4TA0A589 114 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 PI4K2BG5E9Z4 385 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 MCM3P25205 808 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 MIPP30301 263 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 PBX3P40426 434 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 ATP11AP98196 1134 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 ADCY1Q08828 1119 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 PPP2R5EQ16537 467 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 FUT10Q6P4F1 479 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 C4orf50Q6ZRC1 276 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 TMEM199Q8N511 208 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 TMEM30AQ9NV96 361 aa30.87■■■□□ 2.53
LMO2-202ENST00000395833 RAD51CO43502 376 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 ZMYND10O75800 440 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 AMHP03971 560 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 OR4Q2P0C623 313 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 MRPS5P82675 430 aaKnown RBP30.86■■■□□ 2.53
LMO2-202ENST00000395833 BRD3Q15059 726 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 DCP1BQ8IZD4 617 aaKnown RBP30.86■■■□□ 2.53
LMO2-202ENST00000395833 MAIP1Q8WWC4 291 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 NDRG1Q92597 394 aaKnown RBP30.86■■■□□ 2.53
LMO2-202ENST00000395833 FAM149B1Q96BN6 582 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 GPR62Q9BZJ7 368 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 PLEKHA4Q9H4M7 779 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 SLITRK6Q9H5Y7 841 aa30.86■■■□□ 2.53
LMO2-202ENST00000395833 NGRNQ9NPE2 291 aaKnown RBP30.86■■■□□ 2.53
LMO2-202ENST00000395833 DMAP1Q9NPF5 467 aaPredicted RBP30.86■■■□□ 2.53
LMO2-202ENST00000395833 DMGDHQ9UI17 866 aaKnown RBP30.86■■■□□ 2.53
LMO2-202ENST00000395833 FSCN2O14926 492 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 SART1O43290 800 aaKnown RBP30.85■■■□□ 2.53
LMO2-202ENST00000395833 DGKIO75912 1065 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 RALAP11233 206 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 IL1R2P27930 398 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 PCK1P35558 622 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 NDUFV1P49821 464 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 CLCN6P51797 869 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 ELAVL2Q12926 359 aaKnown RBP30.85■■■□□ 2.53
LMO2-202ENST00000395833 SMTNL2Q2TAL5 461 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 SH3PXD2AQ5TCZ1 1133 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 MFSD5Q6N075 450 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 WDR93Q6P2C0 686 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 SLITRK1Q96PX8 696 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 OSBPL8Q9BZF1 889 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 ULBP1Q9BZM6 244 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 UBXN6Q9BZV1 441 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 ZCWPW1Q9H0M4 648 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 STIM2Q9P246 746 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 USP18Q9UMW8 372 aa30.85■■■□□ 2.53
LMO2-202ENST00000395833 LRRD1A4D1F6 860 aa30.84■■■□□ 2.53
LMO2-202ENST00000395833 HSF2BPO75031 334 aa30.84■■■□□ 2.53
LMO2-202ENST00000395833 PHF2O75151 1096 aa30.84■■■□□ 2.53
LMO2-202ENST00000395833 FBXO21O94952 628 aa30.84■■■□□ 2.53
LMO2-202ENST00000395833 TRUB2O95900 331 aaKnown RBP30.84■■■□□ 2.53
LMO2-202ENST00000395833 CTXN3Q4LDR2 81 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms