RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MBD3L2Q8NHZ7 208 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P10-201ENST00000395823 AFG1LQ8WV93 481 aa5.78□□□□□ -1.48
HMGB1P10-201ENST00000395823 ZBTB45Q96K62 511 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P10-201ENST00000395823 WDR24Q96S15 920 aa5.78□□□□□ -1.48
HMGB1P10-201ENST00000395823 VPS16Q9H269 839 aa5.78□□□□□ -1.48
HMGB1P10-201ENST00000395823 TAF1DQ9H5J8 278 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P10-201ENST00000395823 SNX14Q9Y5W7 946 aa5.78□□□□□ -1.48
HMGB1P10-201ENST00000395823 SPATA31A3Q5VYP0 1347 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 PRAMEF33A0A0G2JMD5 474 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 MARCH11A6NNE9 402 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 CAPN14A8MX76 684 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 AHRRA9YTQ3 701 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 PRAMEF10O60809 474 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 SOAT2O75908 522 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 MBD4O95243 580 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 GPANK1O95872 356 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 PRKCBP05771 671 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 CENPBP07199 599 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 ADORA2AP29274 412 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 AKT1P31749 480 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 UQCRC1P31930 480 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 RXRGP48443 463 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 TIAL1Q01085 375 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 SP2Q02086 613 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 DYRK1AQ13627 763 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 TBC1D10BQ4KMP7 808 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 RBM20Q5T481 1227 aaKnown RBP5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 CERCAMQ5T4B2 595 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 TTC22Q5TAA0 569 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 FAM180BQ6P0A1 224 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 MAPKAPK5Q8IW41 473 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 COLGALT2Q8IYK4 626 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 NRSN1Q8IZ57 195 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 SPARTQ8N0X7 666 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 NACC2Q96BF6 587 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 GRAMD1AQ96CP6 724 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 MAELQ96JY0 434 aaKnown RBP5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 KCNC2Q96PR1 638 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 TRAPPC9Q96Q05 1148 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 TWNKQ96RR1 684 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 SEC62Q99442 399 aaKnown RBP5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 SSBP3Q9BWW4 388 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 GPR87Q9BY21 358 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 TMEM160Q9NX00 188 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 SWAP70Q9UH65 585 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 RIMKLBQ9ULI2 386 aa5.77□□□□□ -1.49
HMGB1P10-201ENST00000395823 A6NLC8 198 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 CCNT2O60583 730 aaKnown RBP5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 PPP6R2O75170 966 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 RPP40O75818 363 aaKnown RBP5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 ERBB2P04626 1255 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 ATP1A3P13637 1013 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 MAN1A1P33908 653 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 NPTX2P47972 431 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 PAPOLAP51003 745 aaKnown RBP5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 PGDP52209 483 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 ACTR2P61160 394 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 SATB1Q01826 763 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 TLE2Q04725 743 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 ZNF124Q15973 351 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 GEN1Q17RS7 908 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 CD300EQ496F6 205 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 ATPAF1Q5TC12 328 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 RINT1Q6NUQ1 792 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 MAMDC4Q6UXC1 1216 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 RSRC2Q7L4I2 434 aaKnown RBP5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 CLNKQ7Z7G1 428 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 SLC15A3Q8IY34 581 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 OR6Y1Q8NGX8 325 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 FEZF2Q8TBJ5 459 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 HTRA1Q92743 480 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 SDCCAG3Q96C92 435 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 ZNF668Q96K58 619 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 COG8Q96MW5 612 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 SLC26A6Q9BXS9 759 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 G6PC2Q9NQR9 355 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 KCNE5Q9UJ90 142 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 SERTAD3Q9UJW9 196 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 CNTN6Q9UQ52 1028 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 TMEM98Q9Y2Y6 226 aa5.76□□□□□ -1.49
HMGB1P10-201ENST00000395823 PNMA6EA0A0J9YXQ4 647 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 NPEPPSL1A6NEC2 478 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 PRSS47A8MTI9 375 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 SNX2O60749 519 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 RPS6KA4O75676 772 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 CFIP05156 583 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 CYP21A2P08686 494 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 CAPN3P20807 821 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 RBL1P28749 1068 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 CD6P30203 668 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 NR1H2P55055 460 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 FAM189BP81408 668 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 ANKRD45Q5TZF3 282 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 NFRKBQ6P4R8 1299 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 RAB11FIP2Q7L804 512 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 LIMS2Q7Z4I7 341 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 TBC1D1Q86TI0 1168 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 SGMS1Q86VZ5 419 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 C1QL4Q86Z23 238 aa5.75□□□□□ -1.49
HMGB1P10-201ENST00000395823 SIAH1Q8IUQ4 282 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms