RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 KIAA0391O15091 583 aaKnown RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 LDHAP00338 332 aaKnown RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 KRT18P05783 430 aaKnown RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 COL4A2P08572 1712 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 SPATA31D3P0C874 917 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 ADH5P11766 374 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 ANK1P16157 1881 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 GARTP22102 1010 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 VAMP1P23763 118 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 GBP2P32456 591 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 MCM4P33991 863 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 VCPP55072 806 aaKnown RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 YWHAHQ04917 246 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 TCF15Q12870 199 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 MYBPC2Q14324 1141 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 POSTNQ15063 836 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 RSPO4Q2I0M5 234 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 PABPC1LQ4VXU2 614 aaKnown RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 L1TD1Q5T7N2 865 aaKnown RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 RRAGBQ5VZM2 374 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 SCARA3Q6AZY7 606 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 SPATA31D4Q6ZUB0 917 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 USP49Q70CQ1 688 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 GET4Q7L5D6 327 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 GRASPQ7Z6J2 395 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 SFR1Q86XK3 245 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 SLC44A3Q8N4M1 653 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 C12orf50Q8NA57 414 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 SPATA18Q8TC71 538 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 FGF13Q92913 245 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 WDR89Q96FK6 387 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 RTP3Q9BQQ7 232 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 MSTO1Q9BUK6 570 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 LRRC27Q9C0I9 530 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 RPF1Q9H9Y2 349 aaKnown RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 MAGEF1Q9HAY2 307 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 KBTBD4Q9NVX7 518 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 DNMT3BQ9UBC3 853 aaKnown RBP6.63□□□□□ -1.35
PTPN20-208ENST00000395727 FBXL5Q9UKA1 691 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 CYP8B1Q9UNU6 501 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 EXOC7Q9UPT5 735 aa6.63□□□□□ -1.35
PTPN20-208ENST00000395727 MYMKA6NI61 221 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 OR6C75A6NL08 312 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 LACTBL1A8MY62 500 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 ANKRD63C9JTQ0 380 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 I3L4J1 428 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 SPTLC2O15270 562 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 ECI2O75521 394 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 IL18RAPO95256 599 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 PDGFBP01127 241 aaPredicted RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 LRG1P02750 347 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 H2AFB1P0C5Y9 115 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 H2AFB2P0C5Z0 115 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 ODC1P11926 461 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 HARSP12081 509 aaKnown RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 DRD2P14416 443 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 PTPN2P17706 415 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 MARCKSP29966 332 aaPredicted RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 NMT1P30419 496 aaKnown RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 ADSSP30520 456 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 TNFSF9P41273 254 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 STAT6P42226 847 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 MATR3P43243 847 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 LIG3P49916 1009 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 LILRA4P59901 499 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 RPS26P62854 115 aaKnown RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 SMARCB1Q12824 385 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 GPR17Q13304 367 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 PLD1Q13393 1074 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 DHX8Q14562 1220 aaKnown RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 TMEM132DQ14C87 1099 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 LRRC14Q15048 493 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 CTXN3Q4LDR2 81 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 SEZ6Q53EL9 994 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 ZC2HC1CQ53FD0 456 aaPredicted RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 PRSS36Q5K4E3 855 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 ZBTB41Q5SVQ8 909 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 JADE1Q6IE81 842 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 FAM173BQ6P4H8 233 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 CRELD2Q6UXH1 353 aaPredicted RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 TMEM105Q8N8V8 129 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 C2CD4AQ8NCU7 369 aaPredicted RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 KCNG4Q8TDN1 519 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 FGF14Q92915 247 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 MYRFLQ96LU7 910 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 ZNF396Q96N95 335 aaPredicted RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 CLIC6Q96NY7 704 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 ACCSQ96QU6 501 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 DDX23Q9BUQ8 820 aaKnown RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 OSBPL6Q9BZF3 934 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 SMOC2Q9H3U7 446 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 GSX1Q9H4S2 264 aaPredicted RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 TMEM206Q9H813 350 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 TRPV4Q9HBA0 871 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 TRPV5Q9NQA5 729 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 AGO2Q9UKV8 859 aaKnown RBP6.62□□□□□ -1.35
PTPN20-208ENST00000395727 DSEQ9UL01 958 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 ASB3Q9Y575 518 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 INSL5Q9Y5Q6 135 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 NUMBLQ9Y6R0 609 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms