RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 RPL17P18621 184 aaKnown RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 MAN1A1P33908 653 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 COL13A1Q5TAT6 717 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 TXNRD3NBQ6F5E7 133 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 CC2D1AQ6P1N0 951 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 ZDHHC17Q8IUH5 632 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 DCP1BQ8IZD4 617 aaKnown RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 NIPA2Q8N8Q9 360 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 ATAD1Q8NBU5 361 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 MNS1Q8NEH6 495 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 CFAP57Q96MR6 1250 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 LRRC4Q9HBW1 653 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 CHST7Q9NS84 486 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 OR6C75A6NL08 312 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 TADA3O75528 432 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 PDGFRAP16234 1089 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 LAG3P18627 525 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 TFE3P19532 575 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 GPR15P49685 360 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 SNX16P57768 344 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 PIGHQ14442 188 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 C15orf59Q2T9L4 293 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 USP41Q3LFD5 358 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 ATP13A4Q4VNC1 1196 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 HFE2Q6ZVN8 426 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 SLC26A9Q7LBE3 791 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 RIN2Q8WYP3 895 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 HERVK_113Q902F9 699 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 PBKQ96KB5 322 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 HTATIP2Q9BUP3 242 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 ULBP1Q9BZM6 244 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 DMAP1Q9NPF5 467 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 CCDC66A2RUB6 948 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 C2CD2LO14523 706 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 LRCH4O75427 683 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 PYGMP11217 842 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 GPD1P21695 349 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 GJC1P36383 396 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 SSR1P43307 286 aaKnown RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 ZNF143P52747 638 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 MRPS5P82675 430 aaKnown RBP13.78□□□□□ -0.2
VPS26A-203ENST00000395098 CCDC14Q49A88 953 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 RNF19BQ6ZMZ0 732 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 ANKS3Q6ZW76 656 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 UBL4BQ8N7F7 174 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 CEP112Q8N8E3 955 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 DPF3Q92784 378 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 ABHD8Q96I13 439 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 UBXN6Q9BZV1 441 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 CRISPLD1Q9H336 500 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 CDY1Q9Y6F8 540 aa13.78□□□□□ -0.2
VPS26A-203ENST00000395098 UQCRHLA0A096LP55 91 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 LCHNA4D1U4 455 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 CES2O00748 559 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 UQCRHP07919 91 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 USP17L7P0C7H9 530 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 GRIK1P39086 918 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 BHLHA9Q7RTU4 235 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 HERC6Q8IVU3 1022 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 SIX6OS1Q8N1H7 587 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 RASGEF1CQ8N431 466 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 NOA1Q8NC60 698 aaKnown RBP13.77□□□□□ -0.21
VPS26A-203ENST00000395098 SCAMP5Q8TAC9 235 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 TMEM169Q96HH4 297 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 ZBED2Q9BTP6 218 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 CARD9Q9H257 536 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 SPG21Q9NZD8 308 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 H7C4K7 107 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 CTIFO43310 598 aaKnown RBP13.77□□□□□ -0.21
VPS26A-203ENST00000395098 CAPN15O75808 1086 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 SOAT2O75908 522 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 SOD2P04179 222 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 CPB1P15086 417 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 IL1R2P27930 398 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 GTF2F1P35269 517 aaKnown RBP eCLIP13.77□□□□□ -0.21
VPS26A-203ENST00000395098 DAOAP59103 153 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 ATP11AP98196 1134 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 GPR17Q13304 367 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 LLGL1Q15334 1064 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 NFE2Q16621 373 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-203ENST00000395098 SCN4BQ8IWT1 228 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 ACSF2Q96CM8 615 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-203ENST00000395098 RNPC3Q96LT9 517 aaKnown RBP13.77□□□□□ -0.21
VPS26A-203ENST00000395098 KLHL11Q9NVR0 708 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 MTRRQ9UBK8 725 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 SLC4A7Q9Y6M7 1214 aa13.77□□□□□ -0.21
VPS26A-203ENST00000395098 PTPRDP23468 1912 aa13.76□□□□□ -0.21
VPS26A-203ENST00000395098 CTAGE15A4D2H0 777 aa13.76□□□□□ -0.21
VPS26A-203ENST00000395098 MTMR11A4FU01 709 aa13.76□□□□□ -0.21
VPS26A-203ENST00000395098 YJEFN3A6XGL0 299 aa13.76□□□□□ -0.21
VPS26A-203ENST00000395098 E7ENQ6 273 aa13.76□□□□□ -0.21
VPS26A-203ENST00000395098 TNFRSF10BO14763 440 aa13.76□□□□□ -0.21
VPS26A-203ENST00000395098 CTAGE8P0CG41 777 aa13.76□□□□□ -0.21
VPS26A-203ENST00000395098 SCNN1AP37088 669 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms