RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SLC46A2Q9BY10 475 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 SMG9Q9H0W8 520 aaKnown RBP21.04■□□□□ 0.96
SNCA-203ENST00000394986 TASP1Q9H6P5 420 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 TRPC7Q9HCX4 862 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 PLCB1Q9NQ66 1216 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 HESX1Q9UBX0 185 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.04■□□□□ 0.96
SNCA-203ENST00000394986 NCOR1O75376 2440 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 NCANO14594 1321 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 CUL9Q8IWT3 2517 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 C2orf78A6NCI8 922 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 GOLGA6L19H0YKK7 550 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 M0QYV0 167 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 PRAMEF12O95522 483 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 GNA15P30679 374 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 VIPR2P41587 438 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 POLR2FP61218 127 aaKnown RBP21.04■□□□□ 0.96
SNCA-203ENST00000394986 TPM4P67936 248 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 LCLAT1Q6UWP7 414 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 PIGZQ86VD9 579 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 SMARCD2Q92925 531 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 PLA2G2FQ9BZM2 168 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 RTN4Q9NQC3 1192 aaKnown RBP21.04■□□□□ 0.96
SNCA-203ENST00000394986 IL37Q9NZH6 218 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 EHD2Q9NZN4 543 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 IGSF9Q9P2J2 1179 aa21.04■□□□□ 0.96
SNCA-203ENST00000394986 THAP12O43422 761 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 NARSO43776 548 aaKnown RBP21.03■□□□□ 0.96
SNCA-203ENST00000394986 SERPINC1P01008 464 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 CFHP08603 1231 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 PGFP49763 221 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 BCAT1P54687 386 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 BST2Q10589 180 aaKnown RBP21.03■□□□□ 0.96
SNCA-203ENST00000394986 CNGA2Q16280 664 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 PKDCCQ504Y2 493 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 MTSS1LQ765P7 747 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 ARID3BQ8IVW6 561 aaPredicted RBP21.03■□□□□ 0.96
SNCA-203ENST00000394986 RNF214Q8ND24 703 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 RSPRY1Q96DX4 576 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 SLITRK1Q96PX8 696 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 ERGIC2Q96RQ1 377 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 SLC22A12Q96S37 553 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 PNPLA8Q9NP80 782 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 NLRC4Q9NPP4 1024 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 TRPM5Q9NZQ8 1165 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 GMIPQ9P107 970 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 CHORDC1Q9UHD1 332 aaPredicted RBP21.03■□□□□ 0.96
SNCA-203ENST00000394986 SORCS3Q9UPU3 1222 aa21.03■□□□□ 0.96
SNCA-203ENST00000394986 ZNF840PA6NDX5 716 aa21.02■□□□□ 0.96
SNCA-203ENST00000394986 DCXO43602 365 aa21.02■□□□□ 0.96
SNCA-203ENST00000394986 ABL1P00519 1130 aa21.02■□□□□ 0.96
SNCA-203ENST00000394986 RFX1P22670 979 aa21.02■□□□□ 0.96
SNCA-203ENST00000394986 CLCN1P35523 988 aa21.02■□□□□ 0.96
SNCA-203ENST00000394986 FANCCQ00597 558 aa21.02■□□□□ 0.96
SNCA-203ENST00000394986 MON1AQ86VX9 555 aa21.02■□□□□ 0.96
SNCA-203ENST00000394986 SLC44A3Q8N4M1 653 aa21.02■□□□□ 0.96
SNCA-203ENST00000394986 SECISBP2LQ93073 1101 aaKnown RBP21.02■□□□□ 0.96
SNCA-203ENST00000394986 CYP2S1Q96SQ9 504 aa21.02■□□□□ 0.96
SNCA-203ENST00000394986 A0A1B0GTH6 734 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 FAM92AA1XBS5 289 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 F8VZ95 297 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 XPO1O14980 1071 aaKnown RBP21.01■□□□□ 0.95
SNCA-203ENST00000394986 RGS7P49802 495 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 KIF11P52732 1056 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 SLC8A3P57103 927 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 TDGQ13569 410 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 STILQ15468 1287 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 FILIP1LQ4L180 1135 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 DENND1BQ6P3S1 775 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 SLC47A2Q86VL8 602 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 FAM71AQ8IYT1 594 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 CMTM8Q8IZV2 173 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 NEK11Q8NG66 645 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 ZNF606Q8WXB4 792 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 STK33Q9BYT3 514 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 EPHX3Q9H6B9 360 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 ZFP14Q9HCL3 533 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 CCL26Q9Y258 94 aa21.01■□□□□ 0.95
SNCA-203ENST00000394986 SETSIPP0DME0 302 aa21■□□□□ 0.95
SNCA-203ENST00000394986 ZNF445P59923 1031 aa21■□□□□ 0.95
SNCA-203ENST00000394986 GRM2Q14416 872 aa21■□□□□ 0.95
SNCA-203ENST00000394986 VITQ6UXI7 678 aa21■□□□□ 0.95
SNCA-203ENST00000394986 ARL14EPQ8N8R7 260 aaPredicted RBP21■□□□□ 0.95
SNCA-203ENST00000394986 ELSPBP1Q96BH3 223 aa21■□□□□ 0.95
SNCA-203ENST00000394986 FBXO44Q9H4M3 255 aa21■□□□□ 0.95
SNCA-203ENST00000394986 TRPV4Q9HBA0 871 aa21■□□□□ 0.95
SNCA-203ENST00000394986 COMMD8Q9NX08 183 aa21■□□□□ 0.95
SNCA-203ENST00000394986 GREB1Q4ZG55 1949 aa21■□□□□ 0.95
SNCA-203ENST00000394986 HEPACAM2A8MVW5 462 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 PIK3R2O00459 728 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 ECI2O75521 394 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 DDX6P26196 483 aaKnown RBP eCLIP20.99■□□□□ 0.95
SNCA-203ENST00000394986 AVPR1AP37288 418 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 PLA2G4AP47712 749 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 ZXDAP98168 799 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 RAB41Q5JT25 222 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 PATJQ8NI35 1801 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 NXPE3Q969Y0 559 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 LRRC3BQ96PB8 259 aa20.99■□□□□ 0.95
SNCA-203ENST00000394986 UBXN6Q9BZV1 441 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms