RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 FAM213AQ9BRX8 229 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 TMEM74BQ9NUR3 256 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 TBC1D14Q9P2M4 693 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 KLK13Q9UKR3 277 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 CDH9Q9ULB4 789 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 K7ELQ4 463 aaPredicted RBP21.06■□□□□ 0.96
UPK3B-203ENST00000394849 SGK1O00141 431 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 PPP1R37O75864 691 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 CFIP05156 583 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 SERPINF2P08697 491 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 TIE1P35590 1138 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 DDIT3P35638 169 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 GRIK1P39086 918 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 RESTQ13127 1097 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 CUL4AQ13619 759 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 NUDT18Q6ZVK8 323 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 TTLL2Q9BWV7 592 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 RBAKQ9NYW8 714 aaPredicted RBP21.06■□□□□ 0.96
UPK3B-203ENST00000394849 MBD1Q9UIS9 605 aaPredicted RBP21.06■□□□□ 0.96
UPK3B-203ENST00000394849 FREM2Q5SZK8 3169 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 ITPR1Q14643 2758 aa21.06■□□□□ 0.96
UPK3B-203ENST00000394849 MYO18AQ92614 2054 aaKnown RBP21.05■□□□□ 0.96
UPK3B-203ENST00000394849 SPAARA0A1B0GVQ0 90 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 TRIM66O15016 1216 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 OPHN1O60890 802 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 KRT19P08727 400 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 HNRNPLP14866 589 aaKnown RBP eCLIP21.05■□□□□ 0.96
UPK3B-203ENST00000394849 GARTP22102 1010 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 KIR2DL1P43626 348 aaPredicted RBP21.05■□□□□ 0.96
UPK3B-203ENST00000394849 NOP14P78316 857 aaKnown RBP21.05■□□□□ 0.96
UPK3B-203ENST00000394849 ZXDBP98169 803 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 SOWAHAQ2M3V2 549 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 ARMCX6Q7L4S7 300 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 OSTM1Q86WC4 334 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 PGBD3Q8N328 593 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 CXorf38Q8TB03 319 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 HMGB4Q8WW32 186 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 ACCSQ96QU6 501 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 SYT15Q9BQS2 421 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 STRA6Q9BX79 667 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 ARHGEF4Q9NR80 690 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 CEP192Q8TEP8 1941 aa21.05■□□□□ 0.96
UPK3B-203ENST00000394849 ZNF840PA6NDX5 716 aa21.04■□□□□ 0.96
UPK3B-203ENST00000394849 OLFM2O95897 454 aa21.04■□□□□ 0.96
UPK3B-203ENST00000394849 GAP43P17677 238 aa21.04■□□□□ 0.96
UPK3B-203ENST00000394849 LARP1BQ659C4 914 aaKnown RBP21.04■□□□□ 0.96
UPK3B-203ENST00000394849 OTUB2Q96DC9 234 aa21.04■□□□□ 0.96
UPK3B-203ENST00000394849 MRPL44Q9H9J2 332 aaKnown RBP21.04■□□□□ 0.96
UPK3B-203ENST00000394849 PCDHB13Q9Y5F0 798 aa21.04■□□□□ 0.96
UPK3B-203ENST00000394849 TCRBV21S2A2A0A5A6 115 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 TAF4O00268 1085 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 TULP1O00294 542 aaPredicted RBP21.03■□□□□ 0.96
UPK3B-203ENST00000394849 ZBTB24O43167 697 aaPredicted RBP21.03■□□□□ 0.96
UPK3B-203ENST00000394849 SYPP08247 313 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 TMEM191BP0C7N4 346 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 CHRM1P11229 460 aaPredicted RBP21.03■□□□□ 0.96
UPK3B-203ENST00000394849 ADH5P11766 374 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 BDNFP23560 247 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 ITPKAP23677 461 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 RPL6Q02878 288 aaKnown RBP21.03■□□□□ 0.96
UPK3B-203ENST00000394849 SLC14A1Q13336 389 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 ALCAMQ13740 583 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 L1TD1Q5T7N2 865 aaKnown RBP21.03■□□□□ 0.96
UPK3B-203ENST00000394849 RHBDF2Q6PJF5 856 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 LIMS2Q7Z4I7 341 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 SFR1Q86XK3 245 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 PROSER1Q86XN7 944 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 HSCBQ8IWL3 235 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 MYLPFQ96A32 169 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 SLITRK1Q96PX8 696 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 GTPBP2Q9BX10 602 aaKnown RBP21.03■□□□□ 0.96
UPK3B-203ENST00000394849 CAPN10Q9HC96 672 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 CPQQ9Y646 472 aa21.03■□□□□ 0.96
UPK3B-203ENST00000394849 MYOFQ9NZM1 2061 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 E2F8A0AVK6 867 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 KIAA0391O15091 583 aaKnown RBP21.02■□□□□ 0.96
UPK3B-203ENST00000394849 ADAM23O75077 832 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 SLC6A11P48066 632 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 RAB44Q7Z6P3 723 aaPredicted RBP21.02■□□□□ 0.96
UPK3B-203ENST00000394849 SNX21Q969T3 373 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 ANKRD36BP1Q96IX9 119 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 C8orf48Q96LL4 319 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 RNF38Q9H0F5 515 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 DNAAF2Q9NVR5 837 aaKnown RBP21.02■□□□□ 0.96
UPK3B-203ENST00000394849 STK17AQ9UEE5 414 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 SIX4Q9UIU6 781 aa21.02■□□□□ 0.96
UPK3B-203ENST00000394849 ARHGAP33O14559 1287 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 ATP2C2O75185 946 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 ZNF217O75362 1048 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 OAS1P00973 400 aaKnown RBP21.01■□□□□ 0.95
UPK3B-203ENST00000394849 WNT7BP56706 349 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 CYP27A1Q02318 531 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 GAD2Q05329 585 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 SURF1Q15526 300 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 CCDC142Q17RM4 750 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 TDRD10Q5VZ19 366 aaKnown RBP21.01■□□□□ 0.95
UPK3B-203ENST00000394849 BTBD8Q5XKL5 378 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 SYCP3Q8IZU3 236 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 MINDY1Q8N5J2 469 aa21.01■□□□□ 0.95
UPK3B-203ENST00000394849 FRMD1Q8N878 549 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms