RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 HNRNPH1P31943 449 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 RDXP35241 583 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 EIF3EP60228 445 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 FKBP1BP68106 108 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 IRF5Q13568 498 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 GOLGA7BQ2TAP0 167 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 PMF1Q6P1K2 205 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 OLFML1Q6UWY5 402 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 PPP1R21Q6ZMI0 780 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 CCDC91Q7Z6B0 441 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 UNC93AQ86WB7 457 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 TTC30AQ86WT1 665 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 NPLOC4Q8TAT6 608 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 KHSRPQ92945 711 aaKnown RBP eCLIP16.04■□□□□ 0.163e-7■■■□□ 18.3
UBE2D3-207ENST00000394801 MYCBPQ99417 103 aaPredicted RBP16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 ELAC2Q9BQ52 826 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 CALN1Q9BXU9 219 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 C10orf88Q9H8K7 445 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 SNX9Q9Y5X1 595 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 SMIM35A0A1B0GVV1 85 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 MBLAC1A4D2B0 266 aaPredicted RBP16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 DNM1LO00429 736 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 MCF2LO15068 1137 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 F2P00734 622 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 OAS1P00973 400 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 RBP3P10745 1247 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 ARL4CP56559 192 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 CBLBQ13191 982 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 TFDP2Q14188 446 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 DPYSL3Q14195 570 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 NOMO1Q15155 1222 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 CCDC14Q49A88 953 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 BOLA3Q53S33 107 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 FAM47CQ5HY64 1035 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 ANKRD22Q5VYY1 191 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 NOTUMQ6P988 496 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 CATSPER4Q7RTX7 472 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 TAX1BP1Q86VP1 789 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 VSIG1Q86XK7 387 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 CNPY4Q8N129 248 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 SPATA18Q8TC71 538 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 MGARPQ8TDB4 240 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 PARK7Q99497 189 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 SENP1Q9P0U3 644 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 CNTN3Q9P232 1028 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 NME7Q9Y5B8 376 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 SLC15A5A6NIM6 579 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 PPEF2O14830 753 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 PRPSAP2O60256 369 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 CDH6P55285 790 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 GPX6P59796 221 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 MKRN3Q13064 507 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 PDK2Q15119 407 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 SPRED3Q2MJR0 410 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 C15orf59Q2T9L4 293 aaPredicted RBP16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 ANKRD42Q8N9B4 389 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 BEST2Q8NFU1 509 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 TEKT4Q8WW24 435 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 SGSM3Q96HU1 749 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 MAGEB18Q96M61 343 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 RNF157Q96PX1 679 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 MAK16Q9BXY0 300 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 EIF2AQ9BY44 585 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 CDHR5Q9HBB8 845 aa16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBE2D3-207ENST00000394801 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 TCP11X1B4DZS4 312 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 PRPF4O43172 522 aaKnown RBP eCLIP16.02■□□□□ 0.163e-7■■□□□ 13.1
UBE2D3-207ENST00000394801 DARSP14868 501 aaKnown RBP16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 IL4RP24394 825 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 YARSP54577 528 aaKnown RBP16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 SLC6A3Q01959 620 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 TMED2Q15363 201 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 EFHC2Q5JST6 749 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 ARHGAP17Q68EM7 881 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 ACOT1Q86TX2 421 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 ZDHHC17Q8IUH5 632 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 MAP7D3Q8IWC1 876 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 FAM71DQ8N9W8 422 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 TBCBQ99426 244 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 PTPN18Q99952 460 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 VPS37BQ9H9H4 285 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 NKIRAS1Q9NYS0 192 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 CLUHO75153 1309 aa16.02■□□□□ 0.16
UBE2D3-207ENST00000394801 PIK3R2O00459 728 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 SMIM10L2AP0DMW4 78 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 SMIM10L2BP0DMW5 78 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 TSHRP16473 764 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 AXLP30530 894 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 SNX16P57768 344 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 MMRN1Q13201 1228 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 RAB6CQ53S08 254 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 HP1BP3Q5SSJ5 553 aaPredicted RBP16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 FNBP1LQ5T0N5 605 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 RAB6CQ9H0N0 254 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 TUBGCP4Q9UGJ1 667 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 RABGEF1Q9UJ41 708 aa16.02■□□□□ 0.15
UBE2D3-207ENST00000394801 GNEQ9Y223 722 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms