RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 RXFP2Q8WXD0 754 aa21.33■■□□□ 1.01
HDDC3-202ENST00000394272 RHOBTB2Q9BYZ6 727 aa21.33■■□□□ 1.01
HDDC3-202ENST00000394272 RBM12Q9NTZ6 932 aaKnown RBP21.33■■□□□ 1.01
HDDC3-202ENST00000394272 LRCH4O75427 683 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 GRAP2O75791 330 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 FGGP02679 453 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 BDNFP23560 247 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 ALDH7A1P49419 539 aaKnown RBP21.32■■□□□ 1
HDDC3-202ENST00000394272 RAB41Q5JT25 222 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 C16orf59Q7L2K0 433 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 MMGT1Q8N4V1 131 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 CNPY3Q9BT09 278 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 LRRC4Q9HBW1 653 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 DPYSL4O14531 572 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 PDGFRAP16234 1089 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 C4orf50Q6ZRC1 276 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 CEP57Q86XR8 500 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 KATNAL2Q8IYT4 538 aa21.32■■□□□ 1
HDDC3-202ENST00000394272 OR4Q2P0C623 313 aa21.31■■□□□ 1
HDDC3-202ENST00000394272 RABGGTBP53611 331 aa21.31■■□□□ 1
HDDC3-202ENST00000394272 SLC25A11Q02978 314 aaKnown RBP21.31■■□□□ 1
HDDC3-202ENST00000394272 SEL1L2Q5TEA6 688 aa21.31■■□□□ 1
HDDC3-202ENST00000394272 ZNF280DQ6N043 979 aa21.31■■□□□ 1
HDDC3-202ENST00000394272 RNF168Q8IYW5 571 aaPredicted RBP21.31■■□□□ 1
HDDC3-202ENST00000394272 B3GALT6Q96L58 329 aa21.31■■□□□ 1
HDDC3-202ENST00000394272 DMAP1Q9NPF5 467 aaPredicted RBP21.31■■□□□ 1
HDDC3-202ENST00000394272 SSR1P43307 286 aaKnown RBP21.3■■□□□ 1
HDDC3-202ENST00000394272 TKTL1P51854 596 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 MRPS5P82675 430 aaKnown RBP21.3■■□□□ 1
HDDC3-202ENST00000394272 CLUL1Q15846 466 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 CCDC14Q49A88 953 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 CTXN3Q4LDR2 81 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 RTP2Q5QGT7 225 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 FAM117BQ6P1L5 589 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 OTOP2Q7RTS6 562 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 GPRIN1Q7Z2K8 1008 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 CMTR2Q8IYT2 770 aaKnown RBP21.3■■□□□ 1
HDDC3-202ENST00000394272 DCP1BQ8IZD4 617 aaKnown RBP21.3■■□□□ 1
HDDC3-202ENST00000394272 GPR161Q8N6U8 529 aaKnown RBP21.3■■□□□ 1
HDDC3-202ENST00000394272 NAP1L3Q99457 506 aaPredicted RBP21.3■■□□□ 1
HDDC3-202ENST00000394272 EPC1Q9H2F5 836 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 PNPLA8Q9NP80 782 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 ASNSD1Q9NWL6 643 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 PRKAG2Q9UGJ0 569 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 OR6C75A6NL08 312 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 TBC1D4O60343 1298 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 NDUFV1P49821 464 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 PPIGQ13427 754 aaKnown RBP eCLIP21.3■■□□□ 1
HDDC3-202ENST00000394272 LONRF2Q1L5Z9 754 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 SLC39A12Q504Y0 691 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 EFHC1Q5JVL4 640 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 TXNRD3NBQ6F5E7 133 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 POLNQ7Z5Q5 900 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 SPATA2LQ8IUW3 424 aaPredicted RBP21.3■■□□□ 1
HDDC3-202ENST00000394272 SIX6OS1Q8N1H7 587 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 BADQ92934 168 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 IGSF21Q96ID5 467 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 PLVAPQ9BX97 442 aa21.3■■□□□ 1
HDDC3-202ENST00000394272 FBXO21O94952 628 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 PCK1P35558 622 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 NFE2Q16621 373 aaPredicted RBP21.29■■□□□ 1
HDDC3-202ENST00000394272 C15orf59Q2T9L4 293 aaPredicted RBP21.29■■□□□ 1
HDDC3-202ENST00000394272 ATP13A4Q4VNC1 1196 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 KCNT2Q6UVM3 1135 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 TAS1R1Q7RTX1 841 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 EXD1Q8NHP7 514 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 NDRG1Q92597 394 aaKnown RBP21.29■■□□□ 1
HDDC3-202ENST00000394272 FUBP3Q96I24 572 aaKnown RBP eCLIP21.29■■□□□ 1
HDDC3-202ENST00000394272 CFAP57Q96MR6 1250 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 TTPALQ9BTX7 342 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 C11orf84Q9BUA3 381 aaPredicted RBP21.29■■□□□ 1
HDDC3-202ENST00000394272 ULBP1Q9BZM6 244 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 ANKZF1Q9H8Y5 726 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 CNGB3Q9NQW8 809 aa21.29■■□□□ 1
HDDC3-202ENST00000394272 HSF2BPO75031 334 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 RNF8O76064 485 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 IL1R2P27930 398 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 SDC4P31431 198 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 SH3PXD2AQ5TCZ1 1133 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 SLC13A5Q86YT5 568 aaPredicted RBP21.28■■□□□ 1
HDDC3-202ENST00000394272 VN1R3Q9BXE9 311 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 AP1M1Q9BXS5 423 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 KIAA1671Q9BY89 1806 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 CCDC188H7C350 402 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 KRIT1O00522 736 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 GLI1P08151 1106 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 CYP2F1P24903 491 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 MIPP30301 263 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 GJC1P36383 396 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 PTPN9P43378 593 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 DAOAP59103 153 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 FPGSQ05932 587 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 BTG3Q14201 252 aaPredicted RBP21.28■■□□□ 1
HDDC3-202ENST00000394272 HADHQ16836 314 aaKnown RBP21.28■■□□□ 1
HDDC3-202ENST00000394272 ANKS3Q6ZW76 656 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 ZNF365Q70YC5 407 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 DDX23Q9BUQ8 820 aaKnown RBP21.28■■□□□ 1
HDDC3-202ENST00000394272 NR2E1Q9Y466 385 aa21.28■■□□□ 1
HDDC3-202ENST00000394272 ZRANB2O95218 330 aaKnown RBP eCLIP21.27■■□□□ 1
HDDC3-202ENST00000394272 RHOXF2BP0C7M4 288 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms