RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 TMEM174Q8WUU8 243 aa22.7■■□□□ 1.22
CLDND1-202ENST00000394180 PCDHB18PQ96TA0 734 aa22.7■■□□□ 1.22
CLDND1-202ENST00000394180 AVENQ9NQS1 362 aaPredicted RBP22.7■■□□□ 1.22
CLDND1-202ENST00000394180 RABGEF1Q9UJ41 708 aa22.7■■□□□ 1.22
CLDND1-202ENST00000394180 HALP42357 657 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 TLR1Q15399 786 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 RFX8Q6ZV50 586 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 DEPTORQ8TB45 409 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 PYROXD1Q8WU10 500 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 HSPBAP1Q96EW2 488 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 APOPT1Q96IL0 206 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 OSBPL6Q9BZF3 934 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 ACSS3Q9H6R3 686 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 ZBTB21Q9ULJ3 1066 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 TBX3O15119 743 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 ADCY3O60266 1144 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 TBCAO75347 108 aaKnown RBP22.69■■□□□ 1.22
CLDND1-202ENST00000394180 MED24O75448 989 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 GCNT3O95395 438 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 ACAT1P24752 427 aaKnown RBP22.69■■□□□ 1.22
CLDND1-202ENST00000394180 CAP2P40123 477 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 PFKPQ01813 784 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 LPCAT4Q643R3 524 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 STXBP4Q6ZWJ1 553 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 SCAIQ8N9R8 606 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 EPS8L1Q8TE68 723 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 SLC5A5Q92911 643 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 KCNN1Q92952 543 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 DCPSQ96C86 337 aaKnown RBP22.69■■□□□ 1.22
CLDND1-202ENST00000394180 TCHPQ9BT92 498 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 UBAP1Q9NZ09 502 aa22.69■■□□□ 1.22
CLDND1-202ENST00000394180 ZNF701M0R085 212 aaPredicted RBP22.68■■□□□ 1.22
CLDND1-202ENST00000394180 PSTPIP1O43586 416 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 DNAJA2O60884 412 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 PPARGP37231 505 aaPredicted RBP22.68■■□□□ 1.22
CLDND1-202ENST00000394180 VCPP55072 806 aaKnown RBP22.68■■□□□ 1.22
CLDND1-202ENST00000394180 PDIA2Q13087 525 aaKnown RBP22.68■■□□□ 1.22
CLDND1-202ENST00000394180 PDAP1Q13442 181 aaKnown RBP22.68■■□□□ 1.22
CLDND1-202ENST00000394180 CCNIQ14094 377 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 TRIP10Q15642 601 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 ATG16L1Q676U5 607 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 FAM71AQ8IYT1 594 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 SNX27Q96L92 541 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 CGREF1Q99674 301 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 KIAA1522Q9P206 1035 aaPredicted RBP22.68■■□□□ 1.22
CLDND1-202ENST00000394180 ARMCX1Q9P291 453 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 SEL1LQ9UBV2 794 aa22.68■■□□□ 1.22
CLDND1-202ENST00000394180 DRG1Q9Y295 367 aaKnown RBP22.68■■□□□ 1.22
CLDND1-202ENST00000394180 FRMPD2Q68DX3 1309 aaPredicted RBP22.68■■□□□ 1.22
CLDND1-202ENST00000394180 I3L4J1 428 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 CLIC2O15247 247 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 MAGEB3O15480 346 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 PCSK6P29122 969 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 PMLP29590 882 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 ECE1P42892 770 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 PRKG1Q13976 671 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 POTEHQ6S545 545 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 PCGF5Q86SE9 256 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 ACTRT2Q8TDY3 377 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 PRPF31Q8WWY3 499 aaKnown RBP22.67■■□□□ 1.22
CLDND1-202ENST00000394180 APBB2Q92870 758 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 MRPL1Q9BYD6 325 aaKnown RBP22.67■■□□□ 1.22
CLDND1-202ENST00000394180 KLC2Q9H0B6 622 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 PPARGC1AQ9UBK2 798 aaKnown RBP22.67■■□□□ 1.22
CLDND1-202ENST00000394180 WDR91A4D1P6 747 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 TXNDC9O14530 226 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 LPXNO60711 386 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 CPA2P48052 419 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 USP50Q70EL3 339 aaPredicted RBP22.67■■□□□ 1.22
CLDND1-202ENST00000394180 PRPF39Q86UA1 669 aaKnown RBP22.67■■□□□ 1.22
CLDND1-202ENST00000394180 ALYREFQ86V81 257 aaKnown RBP22.67■■□□□ 1.22
CLDND1-202ENST00000394180 GSTCDQ8NEC7 633 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 CLPTM1LQ96KA5 538 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 NRDE2Q9H7Z3 1164 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 NYAP2Q9P242 653 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 ITGA11Q9UKX5 1188 aa22.67■■□□□ 1.22
CLDND1-202ENST00000394180 IQANK1A0A1B0GTG1 560 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 BOLA2-SMG1P6H3BVE0 249 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 FAM189A1O60320 539 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 FAM58BPP0C7Q3 252 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 BFSP1Q12934 665 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 ZNF423Q2M1K9 1284 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 CCDC153Q494R4 210 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 ASPRV1Q53RT3 343 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 KBTBD6Q86V97 674 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 SULF1Q8IWU6 871 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 TTC13Q8NBP0 860 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 FBXO27Q8NI29 283 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 ACER1Q8TDN7 264 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 PYDC1Q8WXC3 89 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 GRIP2Q9C0E4 1043 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 UBE2TQ9NPD8 197 aaPredicted RBP22.66■■□□□ 1.22
CLDND1-202ENST00000394180 SCHIP1Q9P0W5 487 aaPredicted RBP22.66■■□□□ 1.22
CLDND1-202ENST00000394180 SLC17A7Q9P2U7 560 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 PSMD13Q9UNM6 376 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 ITM2AO43736 263 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 KLHL2O95198 593 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 EIF2S1P05198 315 aaKnown RBP22.66■■□□□ 1.22
CLDND1-202ENST00000394180 HDAC4P56524 1084 aa22.66■■□□□ 1.22
CLDND1-202ENST00000394180 NCOA4Q13772 614 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms