RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CACNA1BQ00975 2339 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 SDK1Q7Z5N4 2213 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 A0A0A0MRY4 1105 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 K7EQS6 105 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 CLDN10P78369 228 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 STPG1Q5TH74 334 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 SNX30Q5VWJ9 437 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 RDH13Q8NBN7 331 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 B3GALNT2Q8NCR0 500 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 PDZD8Q8NEN9 1154 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 GOLGA5Q8TBA6 731 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 ZNF516Q92618 1163 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 CNOT6LQ96LI5 555 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 GZF1Q9H116 711 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 TFIP11Q9UBB9 837 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 MMP17Q9ULZ9 603 aa18.62■□□□□ 0.57
SNRPA1-202ENST00000394082 CNOT1A5YKK6 2376 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 BCLAF3A2AJT9 711 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 RTN3O95197 1032 aaPredicted RBP18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 TAF10Q12962 218 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 TRPC3Q13507 836 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 KNOP1Q1ED39 458 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 USP39Q53GS9 565 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 ATL3Q6DD88 541 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 FILIP1Q7Z7B0 1213 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 NUP93Q8N1F7 819 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 TSTD1Q8NFU3 115 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 CCDC127Q96BQ5 260 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 OTUB2Q96DC9 234 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 LSM14BQ9BX40 385 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 RXFP3Q9NSD7 469 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 POLR3BQ9NW08 1133 aaPredicted RBP18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 COMMD8Q9NX08 183 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 IL37Q9NZH6 218 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 TBC1D14Q9P2M4 693 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 CPQQ9Y646 472 aa18.61■□□□□ 0.57
SNRPA1-202ENST00000394082 E2F8A0AVK6 867 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 A8MXQ7 604 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 CLIC2O15247 247 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 POLR2DO15514 142 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 CYP17A1P05093 508 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 TUBP50607 506 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 CYP2J2P51589 502 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 DGKEP52429 567 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 MYL6P60660 151 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 SHC2P98077 582 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 DHCR24Q15392 516 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 CRY1Q16526 586 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 TTC16Q8NEE8 873 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 B3GNT5Q9BYG0 378 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 ZNF518BQ9C0D4 1074 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 TMEM30AQ9NV96 361 aa18.6■□□□□ 0.57
SNRPA1-202ENST00000394082 CHD8Q9HCK8 2581 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 ATP8B3O60423 1300 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 FAM92AA1XBS5 289 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 CAVIN2O95810 425 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 ADH1CP00326 375 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 CHRM1P11229 460 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 YWHAQP27348 245 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 PMLP29590 882 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 CACNA2D1P54289 1103 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 CCDC6Q16204 474 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 PMS2CLQ68D20 193 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 NELFCDQ8IXH7 590 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 SNX21Q969T3 373 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 TNIP3Q96KP6 325 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 PNKPQ96T60 521 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 BACH2Q9BYV9 841 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 DPEP3Q9H4B8 488 aa18.59■□□□□ 0.57
SNRPA1-202ENST00000394082 EXOC3O60645 756 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 TNFRSF4P43489 277 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 PREPLQ4J6C6 727 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 C2orf27AQ580R0 203 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 RHBDF2Q6PJF5 856 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 SLC9A9Q8IVB4 645 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 OLIG1Q8TAK6 271 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 KCNV2Q8TDN2 545 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 PARD3BQ8TEW8 1205 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 FAM13BQ9NYF5 915 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 CFAP97Q9P2B7 532 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 NXF1Q9UBU9 619 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 ANGPTL2Q9UKU9 493 aa18.58■□□□□ 0.56
SNRPA1-202ENST00000394082 TNFRSF10BO14763 440 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 DCLK1O15075 740 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 PHACTR2O75167 634 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 ALDH1A2O94788 518 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 APODP05090 189 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 ZDHHC11BP0C7U3 371 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 GRIA2P42262 883 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 CREB5Q02930 508 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 RESP18Q5W5W9 173 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 RNF43Q68DV7 783 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 ZFRQ96KR1 1074 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 SLC39A2Q9NP94 309 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 DMAP1Q9NPF5 467 aaPredicted RBP18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 DMAC2Q9NW81 257 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 SMPD4Q9NXE4 827 aa18.57■□□□□ 0.56
SNRPA1-202ENST00000394082 CLDN5O00501 218 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms