RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 RPN1P04843 607 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 DRD1P21728 446 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 CNR2P34972 360 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 IFNAR2P48551 515 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 AP3M2P53677 418 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 SLC7A9P82251 487 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 ZACNQ401N2 412 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 SCARA5Q6ZMJ2 495 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 DGLUCYQ7Z3D6 616 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 GPR161Q8N6U8 529 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 ATP2A3Q93084 1043 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 USP25Q9UHP3 1055 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 TNFRSF10BO14763 440 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 MYL1P05976 194 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 RETP07949 1114 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 PFKLP17858 780 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 OPRD1P41143 372 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 SYKP43405 635 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 KRT85P78386 507 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 AMPD2Q01433 879 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 DPYDQ12882 1025 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 ZNF667Q5HYK9 610 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 SV2AQ7L0J3 742 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 FUKQ8N0W3 1084 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 SCAMP5Q8TAC9 235 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 CD101Q93033 1021 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 GOLPH3LQ9H4A5 285 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 HMGXB4Q9UGU5 601 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 RAB23Q9ULC3 237 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 USP18Q9UMW8 372 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 TRAF3IP3Q9Y228 551 aa19.4■□□□□ 0.7
PDLIM7-205ENST00000393551 SCAMP3O14828 347 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 RHOBTB3O94955 611 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 PPP3CCP48454 512 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 ATXN1P54253 815 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 IFRD2Q12894 506 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 ORC1Q13415 861 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 SPOPLQ6IQ16 392 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 FAM35AQ86V20 835 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 ADGRG2Q8IZP9 1017 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 NUP93Q8N1F7 819 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 FAM160A2Q8N612 972 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 TMC2Q8TDI7 906 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 SMPD4Q9NXE4 827 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 IL37Q9NZH6 218 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 EHD2Q9NZN4 543 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 CPQQ9Y646 472 aa19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-205ENST00000393551 ATG13O75143 517 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 BEST1O76090 585 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 ABL1P00519 1130 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 ASS1P00966 412 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 YWHAQP27348 245 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 ASPAP45381 313 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 PGFP49763 221 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 PDE6CP51160 858 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 MESP2Q0VG99 397 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 SGSM1Q2NKQ1 1148 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 CEP135Q66GS9 1140 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 FILIP1Q7Z7B0 1213 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 ACOT1Q86TX2 421 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 ZMIZ2Q8NF64 920 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 RPLP0P6Q8NHW5 317 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 ZFRQ96KR1 1074 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 CHORDC1Q9UHD1 332 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 MAPK8IP1Q9UQF2 711 aa19.38■□□□□ 0.69
PDLIM7-205ENST00000393551 CCDC163A0A0D9SF12 145 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 IKBKBO14920 756 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 AKAP3O75969 853 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 CYP17A1P05093 508 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 CCDC130P13994 396 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 LMNB2Q03252 620 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 FBXO43Q4G163 708 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 KRBA2Q6ZNG9 492 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 C12orf29Q8N999 325 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 GAB3Q8WWW8 586 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 SLITRK1Q96PX8 696 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 HHIPQ96QV1 700 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 SMOQ99835 787 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 SEMA4GQ9NTN9 838 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 SLC8A2Q9UPR5 921 aa19.37■□□□□ 0.69
PDLIM7-205ENST00000393551 FAM92AA1XBS5 289 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 PRR5-ARHGAP8B1AHC4 643 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 K7EQS6 105 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 COCHO43405 550 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 LRP3O75074 770 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 NFATC1O95644 943 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 HLA-DRAP01903 254 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 ZDHHC11BP0C7U3 371 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 CHRM1P11229 460 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 NDST1P52848 882 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 SLC5A3P53794 718 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 ARHGAP8P85298 464 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 PPP3CAQ08209 521 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 NFIL3Q16649 462 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 SNX30Q5VWJ9 437 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 SYT13Q7L8C5 426 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 KBTBD6Q86V97 674 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 SFTPA1Q8IWL2 248 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms