RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 FCHO1O14526 889 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 COPEO14579 308 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 SKAP2O75563 359 aaPredicted RBP10.43□□□□□ -0.74
COL17A1-203ENST00000393211 TRUB2O95900 331 aaKnown RBP10.43□□□□□ -0.74
COL17A1-203ENST00000393211 SNRPAP09012 282 aaKnown RBP10.43□□□□□ -0.74
COL17A1-203ENST00000393211 RBP3P10745 1247 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 IL1R2P27930 398 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 CCNFP41002 786 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 ELK3P41970 407 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 MAGEA6P43360 314 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 GABRB2P47870 512 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 MXRA7P84157 204 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 CNTN2Q02246 1040 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 GAD2Q05329 585 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 OVGP1Q12889 678 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 NOMO1Q15155 1222 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 RCN1Q15293 331 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 C11orf91Q3C1V1 193 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 C6orf163Q5TEZ5 329 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 SNRNP48Q6IEG0 339 aaKnown RBP10.43□□□□□ -0.74
COL17A1-203ENST00000393211 DSTYKQ6XUX3 929 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 LRRC74BQ6ZQY2 392 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 NET1Q7Z628 596 aaPredicted RBP10.43□□□□□ -0.74
COL17A1-203ENST00000393211 RFX6Q8HWS3 928 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 DNERQ8NFT8 737 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 TFAP2BQ92481 460 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 PTPRN2Q92932 1015 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 ATG4CQ96DT6 458 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 MCRS1Q96EZ8 462 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 SERAC1Q96JX3 654 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 C12orf42Q96LP6 360 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 TEPSINQ96N21 525 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 FAM111AQ96PZ2 611 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 MIS12Q9H081 205 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 WWP1Q9H0M0 922 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 FAM124BQ9H5Z6 455 aaPredicted RBP10.43□□□□□ -0.74
COL17A1-203ENST00000393211 ACAD9Q9H845 621 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 ZWILCHQ9H900 591 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 SCOCQ9UIL1 159 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 CPSF3Q9UKF6 684 aaKnown RBP10.43□□□□□ -0.74
COL17A1-203ENST00000393211 RIPK3Q9Y572 518 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 ASB3Q9Y575 518 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 NUMBLQ9Y6R0 609 aa10.43□□□□□ -0.74
COL17A1-203ENST00000393211 PHIPQ8WWQ0 1821 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 H0Y3Z8 333 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 BIRC5O15392 142 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 MAP3K7O43318 606 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 B4GALT4O60513 344 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 MAFO75444 373 aaPredicted RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 TOMM70O94826 608 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 TNNC2P02585 160 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 PYGBP11216 843 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 PRKCHP24723 683 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 PGM1P36871 562 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 ASPAP45381 313 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 BACE1P56817 501 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 PSMC1P62191 440 aaKnown RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 DYNLT1P63172 113 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 BASP1P80723 227 aaKnown RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 FAAP100Q0VG06 881 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 MTMR2Q13614 643 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 CAPSQ13938 189 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 KPNB1Q14974 876 aaKnown RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 STXBP2Q15833 593 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 ZNF699Q32M78 642 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 TRMT5Q32P41 509 aaKnown RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 KBTBD12Q3ZCT8 623 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 PTPN20Q4JDL3 420 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 DNAL1Q4LDG9 190 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 ACSBG2Q5FVE4 666 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 STXBP5Q5T5C0 1151 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 CYP4A22Q5TCH4 519 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 IER5Q5VY09 327 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 DENND1BQ6P3S1 775 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 RFWD3Q6PCD5 774 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 RINLQ6ZS11 566 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 ILDR2Q71H61 639 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 XYLT1Q86Y38 959 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 FAM71DQ8N9W8 422 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 SMC1BQ8NDV3 1235 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 SPATA18Q8TC71 538 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 USP6NLQ92738 828 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 ACSF2Q96CM8 615 aaPredicted RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 TRAPPC9Q96Q05 1148 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 NR1H4Q96RI1 486 aaPredicted RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 SRPK1Q96SB4 655 aaKnown RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 ACO2Q99798 780 aaKnown RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 BCO2Q9BYV7 579 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 MTMR12Q9C0I1 747 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 XYLT2Q9H1B5 865 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 C2orf40Q9H1Z8 148 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 C1orf21Q9H246 121 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 SLC24A3Q9HC58 644 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 DDX43Q9NXZ2 648 aaKnown RBP10.42□□□□□ -0.74
COL17A1-203ENST00000393211 CHMP2BQ9UQN3 213 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 PLLPQ9Y342 182 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 RLFQ13129 1914 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 LOC285556D6RIA3 1793 aa10.42□□□□□ -0.74
COL17A1-203ENST00000393211 DOCK1Q14185 1865 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 TCRBV7S3A2A0A539 114 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms