RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SLC12A6Q9UHW9 1150 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 ZFP69BQ9UJL9 534 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 TSPAN16Q9UKR8 245 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 MAFBQ9Y5Q3 323 aaPredicted RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 SLC4A7Q9Y6M7 1214 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 SOWAHBA6NEL2 793 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 H3BRB1 525 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 LIASO43766 372 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 MICAL2O94851 1124 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 ATP4AP20648 1035 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 PTK7Q13308 1070 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 SNAPC2Q13487 334 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 LAMC2Q13753 1193 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 CELF3Q5SZQ8 465 aaKnown RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 TAS1R3Q7RTX0 852 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 MFN1Q8IWA4 741 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 SCUBE3Q8IX30 993 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 NLGN2Q8NFZ4 835 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 FBXL18Q96ME1 805 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 AGAP3Q96P47 875 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 STRA6Q9BX79 667 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 TUT1Q9H6E5 874 aaKnown RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 UBN1Q9NPG3 1134 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 MARCOQ9UEW3 520 aaPredicted RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 HES2Q9Y543 173 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 SLX4Q8IY92 1834 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 NHSQ6T4R5 1651 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 EP400Q96L91 3159 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 TTLL13PA6NNM8 815 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 H0YGN5 161 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 ADCYAP1R1P41586 468 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 WNT7BP56706 349 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 MRPS35P82673 323 aaKnown RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 MORF4L2Q15014 288 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 ARMCX2Q7L311 632 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 TFAP2BQ92481 460 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 FOXP3Q9BZS1 431 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 SETD4Q9NVD3 440 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 FAF1Q9UNN5 650 aaPredicted RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 SMG5Q9UPR3 1016 aaKnown RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 NFS1Q9Y697 457 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 TMEM191CA6NGB0 347 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 USP2O75604 605 aaPredicted RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 KCNA3P22001 575 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 EIF4BP23588 611 aaKnown RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 MMP13P45452 471 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 GEMIN4P57678 1058 aaKnown RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 MMRN1Q13201 1228 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 MAP7D1Q3KQU3 841 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 PTPN20Q4JDL3 420 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 NPNTQ6UXI9 565 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 FAM172AQ8WUF8 416 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 OSMRQ99650 979 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 IFT122Q9HBG6 1241 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 SENP1Q9P0U3 644 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 E2F8A0AVK6 867 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 E5RJQ4 531 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 DCTN3O75935 186 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 FASTKD3Q14CZ7 662 aaKnown RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 ANKRD20A2Q5SQ80 823 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 ANKRD20A1Q5TYW2 823 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 PLEKHA7Q6IQ23 1121 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 DPY19L2P1Q6NXN4 242 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 KIAA0319LQ8IZA0 1049 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 C12orf29Q8N999 325 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 SMYD2Q9NRG4 433 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 SNTG2Q9NY99 539 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 PHTF1Q9UMS5 762 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 CCL15-CCL14A0A0B4J2E2 113 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 CCDC78A2IDD5 438 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 ARHGAP42A6NI28 874 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 MTA2O94776 668 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 VDRP11473 427 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 ZNF200P98182 395 aaPredicted RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 CCL15Q16663 113 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 TXNRD3NBQ6F5E7 133 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 RFX8Q6ZV50 586 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 FBXO41Q8TF61 875 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 DDX1Q92499 740 aaKnown RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 PAFAH2Q99487 392 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 PCDH9Q9HC56 1237 aa10.98□□□□□ -0.65
CALD1-203ENST00000393118 KLHL8Q9P2G9 620 aaPredicted RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 PPARGC1AQ9UBK2 798 aaKnown RBP10.98□□□□□ -0.65
CALD1-203ENST00000393118 DNM1LO00429 736 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 CYP2C9P11712 490 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 NQO1P15559 274 aaKnown RBP10.97□□□□□ -0.65
CALD1-203ENST00000393118 TARSP26639 723 aaKnown RBP10.97□□□□□ -0.65
CALD1-203ENST00000393118 SPDYCQ5MJ68 293 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 UBAP2Q5T6F2 1119 aaKnown RBP10.97□□□□□ -0.65
CALD1-203ENST00000393118 DSTYKQ6XUX3 929 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 ZDHHC14Q8IZN3 488 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 ZCCHC9Q8N567 271 aaKnown RBP10.97□□□□□ -0.65
CALD1-203ENST00000393118 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.97□□□□□ -0.65
CALD1-203ENST00000393118 CFAP61Q8NHU2 1237 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 DTX3LQ8TDB6 740 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 FAM111AQ96PZ2 611 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 LRRC4CQ9HCJ2 640 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 PIH1D1Q9NWS0 290 aaKnown RBP10.97□□□□□ -0.65
CALD1-203ENST00000393118 TJP2Q9UDY2 1190 aa10.97□□□□□ -0.65
CALD1-203ENST00000393118 TPD52L2O43399 206 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms