RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 OAS1P00973 400 aaKnown RBP12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 USP17L7P0C7H9 530 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 ZDHHC11BP0C7U3 371 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 CCDC130P13994 396 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 HOXD11P31277 338 aaPredicted RBP12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 MAGEA9P43362 315 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 RPS9P46781 194 aaKnown RBP12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 FMO5P49326 533 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 SLC7A9P82251 487 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 ZXDBP98169 803 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 TAF10Q12962 218 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 USP4Q13107 963 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 PAK1Q13153 545 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 ZNF77Q15935 545 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 DCAF17Q5H9S7 520 aaPredicted RBP12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 TCERG1LQ5VWI1 586 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 YAF2Q8IY57 180 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 TTC39CQ8N584 583 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 UBR7Q8N806 425 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 KIAA1958Q8N8K9 716 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 SCAMP5Q8TAC9 235 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 SLC2A14Q8TDB8 520 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 OVCA2Q8WZ82 227 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 MSANTD3Q96H12 275 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 ZFYVE19Q96K21 471 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 ARID3AQ99856 593 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 RNF38Q9H0F5 515 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 C8orf33Q9H7E9 229 aaPredicted RBP12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 DMAP1Q9NPF5 467 aaPredicted RBP12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 HPS4Q9NQG7 708 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 GKN1Q9NS71 199 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 CISHQ9NSE2 258 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 ARHGAP26Q9UNA1 814 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 CTNND2Q9UQB3 1225 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 PIAS3Q9Y6X2 628 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 KIAA1549LQ6ZVL6 1849 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 H0Y858 1186 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 P4HA2O15460 535 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 AP1G2O75843 785 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 GNA14O95837 355 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 HDCP19113 662 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 YWHAQP27348 245 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 RAD23BP54727 409 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 STX17P56962 302 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 WDR44Q5JSH3 913 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 MAMSTRQ6ZN01 415 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 CLEC20AQ6ZU45 233 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 IRF2BP1Q8IU81 584 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 MAML2Q8IZL2 1156 aaPredicted RBP12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 SLC4A11Q8NBS3 891 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 CHFRQ96EP1 664 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 CYFIP2Q96F07 1278 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 PHOX2BQ99453 314 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 MED10Q9BTT4 135 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 SRRTQ9BXP5 876 aaKnown RBP12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 PNPLA8Q9NP80 782 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 KRT82Q9NSB4 513 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 FAM49BQ9NUQ9 324 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 THG1LQ9NWX6 298 aaKnown RBP12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 GTSE1Q9NYZ3 720 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 RWDD2AQ9UIY3 292 aa12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 MRPS17Q9Y2R5 130 aaKnown RBP12.07□□□□□ -0.48
IGHV4-28-201ENST00000390612 SPAG17Q6Q759 2223 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 SPTBN4Q9H254 2564 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 OTOL1A6NHN0 477 aaPredicted RBP12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 PROB1E7EW31 1015 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 CHRNB1P11230 501 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 CD58P19256 250 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 RFX1P22670 979 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 CTHP32929 405 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 PDE6CP51160 858 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 SLC5A3P53794 718 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 TNK2Q07912 1038 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 CUL2Q13617 745 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 UBXN2BQ14CS0 331 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 ANGPT1Q15389 498 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 ITPRIPL2Q3MIP1 535 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 CCDC40Q4G0X9 1142 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 PPP1R26Q5T8A7 1209 aaPredicted RBP12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 ARHGAP17Q68EM7 881 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 C1orf228Q6PIY5 440 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 TXNDC11Q6PKC3 985 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 RALGPS2Q86X27 583 aaPredicted RBP12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 C1orf210Q8IVY1 113 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 MLKLQ8NB16 471 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 PDZD8Q8NEN9 1154 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 CSGALNACT1Q8TDX6 532 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 FAM3CQ92520 227 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 TMEM176AQ96HP8 235 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 SLITRK1Q96PX8 696 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 DUSP16Q9BY84 665 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 TRPC7Q9HCX4 862 aa12.06□□□□□ -0.48
IGHV4-28-201ENST00000390612 SPECC1L-ADORA2AF8WAN1 911 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 NCAM2O15394 837 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 CLSTN1O94985 981 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 CKMP06732 381 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 FAM200BP0CF97 657 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 ACO1P21399 889 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms