RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 ZNF396Q96N95 335 aaPredicted RBP9.59□□□□□ -0.87
TRAV20-201ENST00000390448 USP28Q96RU2 1077 aa9.59□□□□□ -0.87
TRAV20-201ENST00000390448 MRPL45Q9BRJ2 306 aaKnown RBP9.59□□□□□ -0.87
TRAV20-201ENST00000390448 ELOVL4Q9GZR5 314 aa9.59□□□□□ -0.87
TRAV20-201ENST00000390448 TNMDQ9H2S6 317 aa9.59□□□□□ -0.87
TRAV20-201ENST00000390448 CUEDC2Q9H467 287 aa9.59□□□□□ -0.87
TRAV20-201ENST00000390448 TMEM9BQ9NQ34 198 aa9.59□□□□□ -0.87
TRAV20-201ENST00000390448 TBC1D14Q9P2M4 693 aa9.59□□□□□ -0.87
TRAV20-201ENST00000390448 NXF1Q9UBU9 619 aaKnown RBP9.59□□□□□ -0.87
TRAV20-201ENST00000390448 MMP17Q9ULZ9 603 aa9.59□□□□□ -0.87
TRAV20-201ENST00000390448 CFAP47Q6ZTR5 3102 aa9.59□□□□□ -0.87
TRAV20-201ENST00000390448 SPAG17Q6Q759 2223 aa9.59□□□□□ -0.87
TRAV20-201ENST00000390448 ATP8B3O60423 1300 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 PTPRJQ12913 1337 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 A0A087X0B3 334 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 TBC1D3BA6NDS4 549 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 TM4SF5O14894 197 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 SPTLC2O15270 562 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 EIF3DO15371 548 aaKnown RBP eCLIP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 TACC1O75410 805 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 RTN3O95197 1032 aaPredicted RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 KAT7O95251 611 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 KLF8O95600 359 aaPredicted RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 YWHAQP27348 245 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 PMLP29590 882 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 OPRD1P41143 372 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 SLC6A11P48066 632 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 SLC7A9P82251 487 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 BIRC3Q13489 604 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 CRY1Q16526 586 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 EOGTQ5NDL2 527 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 FAM26FQ5R3K3 315 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 LPCAT2Q7L5N7 544 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 NELFCDQ8IXH7 590 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 NUP93Q8N1F7 819 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 ALLCQ8N6M5 410 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 XXYLT1Q8NBI6 393 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 TXNDC5Q8NBS9 432 aaKnown RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 GLIS3Q8NEA6 775 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 PDZD8Q8NEN9 1154 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 WHAMMQ8TF30 809 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 EZH1Q92800 747 aaPredicted RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 FBXO32Q969P5 355 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 SYAP1Q96A49 352 aaPredicted RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 CNOT6LQ96LI5 555 aaKnown RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 NUSAP1Q9BXS6 441 aaKnown RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 RNF38Q9H0F5 515 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 ARHGEF4Q9NR80 690 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 AGPAT3Q9NRZ7 376 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 TFIP11Q9UBB9 837 aaKnown RBP9.58□□□□□ -0.88
TRAV20-201ENST00000390448 SH3BP1Q9Y3L3 701 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 CHD6Q8TD26 2715 aa9.58□□□□□ -0.88
TRAV20-201ENST00000390448 LNP1A1A4G5 178 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 CLDN5O00501 218 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 STX6O43752 255 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 EXOC3O60645 756 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 CYP17A1P05093 508 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 FAM163BP0C2L3 166 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 ADH5P11766 374 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 TRIM21P19474 475 aaKnown RBP9.57□□□□□ -0.88
TRAV20-201ENST00000390448 GRIA2P42262 883 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 ATXN3P54252 364 aaPredicted RBP9.57□□□□□ -0.88
TRAV20-201ENST00000390448 SNRPFP62306 86 aaKnown RBP9.57□□□□□ -0.88
TRAV20-201ENST00000390448 SHC2P98077 582 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 GAD2Q05329 585 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 KDSRQ06136 332 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 CYP24A1Q07973 514 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 ZNF252P-AS1Q0IIN9 211 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 FOXC1Q12948 553 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 PSMD6Q15008 389 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 ANO4Q32M45 955 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 HSF5Q4G112 596 aaPredicted RBP9.57□□□□□ -0.88
TRAV20-201ENST00000390448 HECTD3Q5T447 861 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 SH3PXD2AQ5TCZ1 1133 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 PMS2CLQ68D20 193 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 SDE2Q6IQ49 451 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 ARMCX6Q7L4S7 300 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 LIMS2Q7Z4I7 341 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 KIAA1958Q8N8K9 716 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 NAT16Q8N8M0 369 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 B3GALNT2Q8NCR0 500 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 MDGA1Q8NFP4 955 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 ZNF507Q8TCN5 953 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 HMGB4Q8WW32 186 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 RLN3Q8WXF3 142 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 TNIP3Q96KP6 325 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 CGRRF1Q99675 332 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 TTLL2Q9BWV7 592 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 TRIM9Q9C026 710 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 ZNF518BQ9C0D4 1074 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 DPEP3Q9H4B8 488 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 DEC1Q9P2X7 70 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 CHORDC1Q9UHD1 332 aaPredicted RBP9.57□□□□□ -0.88
TRAV20-201ENST00000390448 USP24Q9UPU5 2620 aa9.57□□□□□ -0.88
TRAV20-201ENST00000390448 FRYQ5TBA9 3013 aa9.56□□□□□ -0.88
TRAV20-201ENST00000390448 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.56□□□□□ -0.88
TRAV20-201ENST00000390448 TCRBV21S2A2A0A5A6 115 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms