RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 COMMD8Q9NX08 183 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 CDH22Q9UJ99 828 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 BZW2Q9Y6E2 419 aaKnown RBP16.33■□□□□ 0.2
PDGFB-202ENST00000381551 MFAP3LO75121 409 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 RTN3O95197 1032 aaPredicted RBP16.32■□□□□ 0.2
PDGFB-202ENST00000381551 CDH5P33151 784 aaPredicted RBP16.32■□□□□ 0.2
PDGFB-202ENST00000381551 MYH10P35580 1976 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 NTHL1P78549 312 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 CYP4A22Q5TCH4 519 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 GPRIN1Q7Z2K8 1008 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 TMC8Q8IU68 726 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 PASD1Q8IV76 773 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 CNGA4Q8IV77 575 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 TC2NQ8N9U0 490 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
PDGFB-202ENST00000381551 SUSD6Q92537 303 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 DOCK6Q96HP0 2047 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 HSFY1Q96LI6 401 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 PCDHB18PQ96TA0 734 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 TTLL2Q9BWV7 592 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 SLC4A5Q9BY07 1137 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 IL21Q9HBE4 155 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 ZNF334Q9HCZ1 680 aaPredicted RBP16.32■□□□□ 0.2
PDGFB-202ENST00000381551 WDR6Q9NNW5 1121 aaKnown RBP16.32■□□□□ 0.2
PDGFB-202ENST00000381551 AVENQ9NQS1 362 aaPredicted RBP16.32■□□□□ 0.2
PDGFB-202ENST00000381551 ABHD10Q9NUJ1 306 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 EHD2Q9NZN4 543 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 CYTH4Q9UIA0 394 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 MAGED2Q9UNF1 606 aaPredicted RBP16.32■□□□□ 0.2
PDGFB-202ENST00000381551 USP3Q9Y6I4 520 aa16.32■□□□□ 0.2
PDGFB-202ENST00000381551 FAM92AA1XBS5 289 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 GRXCR2A6NFK2 248 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 MBTPS2O43462 519 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 CYP1A1P04798 512 aaPredicted RBP16.31■□□□□ 0.2
PDGFB-202ENST00000381551 SERPING1P05155 500 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 RHOP08100 348 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 YWHAQP27348 245 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 MTHFRP42898 656 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 SLC5A3P53794 718 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 PABPC1LQ4VXU2 614 aaKnown RBP16.31■□□□□ 0.2
PDGFB-202ENST00000381551 ZNF571Q7Z3V5 609 aaPredicted RBP16.31■□□□□ 0.2
PDGFB-202ENST00000381551 TMEM110Q86TL2 294 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 LEMD2Q8NC56 503 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 TMEM35BQ8NCS4 154 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 OLIG1Q8TAK6 271 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 RIPOR3Q96MK2 946 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 ASAH2Q9NR71 780 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 IMPACTQ9P2X3 320 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 USP15Q9Y4E8 981 aaPredicted RBP16.31■□□□□ 0.2
PDGFB-202ENST00000381551 GREB1Q4ZG55 1949 aa16.31■□□□□ 0.2
PDGFB-202ENST00000381551 COL6A3P12111 3177 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 NOTCH4Q99466 2003 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
PDGFB-202ENST00000381551 F11P03951 625 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 MYL4P12829 197 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 UNGP13051 313 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-202ENST00000381551 TNFAIP3P21580 790 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 CCR2P41597 374 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 RGS7P49802 495 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 TKTL1P51854 596 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 TFF2Q03403 129 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 TAF10Q12962 218 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 PDCLQ13371 301 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 SMAD4Q13485 552 aaKnown RBP16.3■□□□□ 0.2
PDGFB-202ENST00000381551 TSR1Q2NL82 804 aaKnown RBP16.3■□□□□ 0.2
PDGFB-202ENST00000381551 PRSS36Q5K4E3 855 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 PM20D1Q6GTS8 502 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 TRIM72Q6ZMU5 477 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 GAREM2Q75VX8 874 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 TMEM150AQ86TG1 271 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 C1orf131Q8NDD1 294 aaKnown RBP16.3■□□□□ 0.2
PDGFB-202ENST00000381551 NECTIN4Q96NY8 510 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 FBXO44Q9H4M3 255 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 LRRC4Q9HBW1 653 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 CYLDQ9NQC7 956 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 ARHGAP20Q9P2F6 1191 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 UXTQ9UBK9 157 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-202ENST00000381551 CHORDC1Q9UHD1 332 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-202ENST00000381551 CEP83Q9Y592 693 aa16.3■□□□□ 0.2
PDGFB-202ENST00000381551 ZNF197O14709 1029 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 MOSPD3O75425 235 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 FGF19O95750 216 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 PLEKP08567 350 aaPredicted RBP16.29■□□□□ 0.2
PDGFB-202ENST00000381551 LCP1P13796 627 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 GABRR2P28476 465 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 NOMO3P69849 1222 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 IFRD2Q12894 506 aaPredicted RBP16.29■□□□□ 0.2
PDGFB-202ENST00000381551 CBX2Q14781 532 aaPredicted RBP16.29■□□□□ 0.2
PDGFB-202ENST00000381551 SLC5A9Q2M3M2 681 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 PUS10Q3MIT2 529 aaKnown RBP16.29■□□□□ 0.2
PDGFB-202ENST00000381551 PDZD4Q76G19 769 aaPredicted RBP16.29■□□□□ 0.2
PDGFB-202ENST00000381551 SCUBE3Q8IX30 993 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 SPC24Q8NBT2 197 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 SLC30A5Q8TAD4 765 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 CPA5Q8WXQ8 436 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 TCEAL4Q96EI5 215 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 PPP1R13BQ96KQ4 1090 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 NOX5Q96PH1 765 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms