RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 COPAP53621 1224 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 PACS2Q86VP3 889 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 CCDC60Q8IWA6 550 aaPredicted RBP17.78■□□□□ 0.44
SGCB-201ENST00000381431 IL31RAQ8NI17 732 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 TCP10LQ8TDR4 215 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 ZNF512Q96ME7 567 aaPredicted RBP17.78■□□□□ 0.44
SGCB-201ENST00000381431 OSMRQ99650 979 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 ZBED2Q9BTP6 218 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 LMCD1Q9NZU5 365 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 JCHAINP01591 159 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 ITGB5P18084 799 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 RPL10AP62906 217 aaKnown RBP17.78■□□□□ 0.44
SGCB-201ENST00000381431 ARSHQ5FYA8 562 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 SHCBP1Q8NEM2 672 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 SPATC1LQ9H0A9 340 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 KCTD10Q9H3F6 313 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 LATS2Q9NRM7 1088 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 NDST1P52848 882 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 PRUNE1Q86TP1 453 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 PRELID2Q8N945 189 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 SEPT5Q99719 369 aaPredicted RBP17.78■□□□□ 0.44
SGCB-201ENST00000381431 HSD17B14Q9BPX1 270 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 KDM4CQ9H3R0 1056 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 CHST12Q9NRB3 414 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 ABI2Q9NYB9 513 aaPredicted RBP17.78■□□□□ 0.44
SGCB-201ENST00000381431 SLC24A2Q9UI40 661 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 TSPAN16Q9UKR8 245 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 SHOC2Q9UQ13 582 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 TCHHQ07283 1943 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 H3BRB1 525 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 TGFB1I1O43294 461 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 AVPR1AP37288 418 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 NUDT2P50583 147 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 SKOR1P84550 965 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 PGM2Q96G03 612 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 TUT1Q9H6E5 874 aaKnown RBP17.78■□□□□ 0.44
SGCB-201ENST00000381431 KIAA1257Q9ULG3 409 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 DNAJC16Q9Y2G8 782 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 DSG3P32926 999 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 OR1G1P47890 313 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 PDK2Q15119 407 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 MGAT5BQ3V5L5 792 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 OLFM3Q96PB7 478 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 SLC38A7Q9NVC3 462 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 SNX5Q9Y5X3 404 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 RRN3P2A6NIE6 340 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 AP3B1O00203 1094 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 BTKQ06187 659 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 SCUBE3Q8IX30 993 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 MOSPD1Q9UJG1 213 aa17.77■□□□□ 0.44
SGCB-201ENST00000381431 ARHGAP10A1A4S6 786 aa17.77■□□□□ 0.43
SGCB-201ENST00000381431 ATP9AO75110 1047 aa17.77■□□□□ 0.43
SGCB-201ENST00000381431 FGRP09769 529 aa17.77■□□□□ 0.43
SGCB-201ENST00000381431 CHSY1Q86X52 802 aa17.77■□□□□ 0.43
SGCB-201ENST00000381431 MIB1Q86YT6 1006 aa17.77■□□□□ 0.43
SGCB-201ENST00000381431 ALG3Q92685 438 aa17.77■□□□□ 0.43
SGCB-201ENST00000381431 PWWP2AQ96N64 755 aa17.77■□□□□ 0.43
SGCB-201ENST00000381431 ILKAPQ9H0C8 392 aaPredicted RBP17.77■□□□□ 0.43
SGCB-201ENST00000381431 GLB1LQ6UWU2 654 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 SLFN11Q7Z7L1 901 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 SUGP1Q8IWZ8 645 aaKnown RBP17.76■□□□□ 0.43
SGCB-201ENST00000381431 BHMTQ93088 406 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 TMEM237Q96Q45 408 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 HSD3B7Q9H2F3 369 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 CASS4Q9NQ75 786 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 STX18Q9P2W9 335 aaKnown RBP17.76■□□□□ 0.43
SGCB-201ENST00000381431 CDYLQ9Y232 598 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 V9GYQ6 96 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 MTSS1O43312 755 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 UPP2O95045 317 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 STMN1P16949 149 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 VHLP40337 213 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 TWF1Q12792 350 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 RASA2Q15283 850 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 C4orf22Q6V702 233 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 ERO1BQ86YB8 467 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 ETNPPLQ8TBG4 499 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 UNKQ9C0B0 810 aaKnown RBP17.76■□□□□ 0.43
SGCB-201ENST00000381431 TIMM13Q9Y5L4 95 aaPredicted RBP17.76■□□□□ 0.43
SGCB-201ENST00000381431 ZNF286BP0CG31 522 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 ATP6V1B1P15313 513 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 HMOX2P30519 316 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 DENND1BQ6P3S1 775 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 TEX9Q8N6V9 391 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 TMEM120AQ9BXJ8 343 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 ZCWPW1Q9H0M4 648 aa17.76■□□□□ 0.43
SGCB-201ENST00000381431 KBTBD13C9JR72 458 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 KCNK1O00180 336 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 GLRA3O75311 464 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 ZCCHC18P0CG32 403 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 ETS1P14921 441 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 SERPINB5P36952 375 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 FDFT1P37268 417 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 PNPLA4P41247 253 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 GANCQ8TET4 914 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 TSPAN17Q96FV3 270 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 RXFP1Q9HBX9 757 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 CYP4F12Q9HCS2 524 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 O00370 1275 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 SUPT7LO94864 414 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms