RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 AKAP3O75969 853 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 ARSAP15289 507 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 CASP1P29466 404 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 SLC7A9P82251 487 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 STK4Q13043 487 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 NCOA4Q13772 614 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 CCDC142Q17RM4 750 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 EML3Q32P44 896 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 KMT5BQ4FZB7 885 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-202ENST00000381208 NUP93Q8N1F7 819 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 TMC2Q8TDI7 906 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 CD101Q93033 1021 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 LOXL4Q96JB6 756 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 CYP2S1Q96SQ9 504 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 DNAI2Q9GZS0 605 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 COMMD8Q9NX08 183 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 CDV3Q9UKY7 258 aaKnown RBP13.82□□□□□ -0.2
RPAIN-202ENST00000381208 ZNF638Q14966 1978 aaKnown RBP13.82□□□□□ -0.2
RPAIN-202ENST00000381208 DCHS1Q96JQ0 3298 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 KIF26AQ9ULI4 1882 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-202ENST00000381208 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-202ENST00000381208 C2orf78A6NCI8 922 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 OTOL1A6NHN0 477 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-202ENST00000381208 LRRIQ3A6PVS8 624 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-202ENST00000381208 HRO43593 1189 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 RNF40O75150 1001 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 CLSTN1O94985 981 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 OLFM2O95897 454 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 C4BPAP04003 597 aaKnown RBP13.81□□□□□ -0.2
RPAIN-202ENST00000381208 PFKFB1P16118 471 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 YWHAQP27348 245 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 SYKP43405 635 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 GALK1P51570 392 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 ENPEPQ07075 957 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 PKP1Q13835 747 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 RSPO4Q2I0M5 234 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-202ENST00000381208 SGSM1Q2NKQ1 1148 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 HEATR6Q6AI08 1181 aaKnown RBP13.81□□□□□ -0.2
RPAIN-202ENST00000381208 KIAA0895Q8NCT3 520 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 RIN3Q8TB24 985 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 SLC22A12Q96S37 553 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 RTKNQ9BST9 563 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 SCAND2PQ9GZW5 306 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-202ENST00000381208 GZF1Q9H116 711 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-202ENST00000381208 KCTD10Q9H3F6 313 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 HPSEQ9Y251 543 aa13.81□□□□□ -0.2
RPAIN-202ENST00000381208 FRYLO94915 3013 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 FAM237AA0A1B0GTK4 181 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 A0A1B0GVL5 298 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 EGFP01133 1207 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 NR3C1P04150 777 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 TGM1P22735 817 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 TAF10Q12962 218 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 CSRP2Q16527 193 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 NFIL3Q16649 462 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 ZACNQ401N2 412 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 SYT13Q7L8C5 426 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 CACNA2D4Q7Z3S7 1137 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 UNC93AQ86WB7 457 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 GRAMD1CQ8IYS0 662 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 NETO1Q8TDF5 533 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 GAB3Q8WWW8 586 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 CHFRQ96EP1 664 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 SMARCD1Q96GM5 515 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 IMPG2Q9BZV3 1241 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 ZNF518BQ9C0D4 1074 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 DMAP1Q9NPF5 467 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-202ENST00000381208 TBC1D14Q9P2M4 693 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 TRAF3IP3Q9Y228 551 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 WNT6Q9Y6F9 365 aa13.8□□□□□ -0.2
RPAIN-202ENST00000381208 LEFTY2O00292 366 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 RPP40O75818 363 aaKnown RBP13.79□□□□□ -0.2
RPAIN-202ENST00000381208 RHOBTB3O94955 611 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 OAS1P00973 400 aaKnown RBP13.79□□□□□ -0.2
RPAIN-202ENST00000381208 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
RPAIN-202ENST00000381208 EIF2DP41214 584 aaKnown RBP13.79□□□□□ -0.2
RPAIN-202ENST00000381208 TUBP50607 506 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 USP46P62068 366 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 DMWDQ09019 674 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 LPAL2Q16609 132 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 PREPLQ4J6C6 727 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-202ENST00000381208 INTS8Q75QN2 995 aaKnown RBP13.79□□□□□ -0.2
RPAIN-202ENST00000381208 TTC16Q8NEE8 873 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 FBXO32Q969P5 355 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 OTUB2Q96DC9 234 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 DUSP9Q99956 384 aaKnown RBP13.79□□□□□ -0.2
RPAIN-202ENST00000381208 MED10Q9BTT4 135 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 B3GNT5Q9BYG0 378 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 NME7Q9Y5B8 376 aa13.79□□□□□ -0.2
RPAIN-202ENST00000381208 DMXL1Q9Y485 3027 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 A0A1W2PQ27 194 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 A0A1W2PQ64 194 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 A0A1W2PQD8 194 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 ABL1P00519 1130 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 CASP4P49662 377 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 SPEM2Q0P670 501 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 HSF5Q4G112 596 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms