RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 PDGFRAP16234 1089 aa20.62■□□□□ 0.89
CCM2-202ENST00000381112 BDNFP23560 247 aa20.62■□□□□ 0.89
CCM2-202ENST00000381112 CLUL1Q15846 466 aa20.62■□□□□ 0.89
CCM2-202ENST00000381112 ARCQ7LC44 396 aa20.62■□□□□ 0.89
CCM2-202ENST00000381112 KATNAL2Q8IYT4 538 aa20.62■□□□□ 0.89
CCM2-202ENST00000381112 GPR161Q8N6U8 529 aaKnown RBP20.62■□□□□ 0.89
CCM2-202ENST00000381112 EPC1Q9H2F5 836 aa20.62■□□□□ 0.89
CCM2-202ENST00000381112 LRRC4Q9HBW1 653 aa20.62■□□□□ 0.89
CCM2-202ENST00000381112 HHLA1C9JL84 531 aa20.61■□□□□ 0.89
CCM2-202ENST00000381112 EFEMP2O95967 443 aa20.61■□□□□ 0.89
CCM2-202ENST00000381112 ALDH7A1P49419 539 aaKnown RBP20.61■□□□□ 0.89
CCM2-202ENST00000381112 RAB41Q5JT25 222 aa20.61■□□□□ 0.89
CCM2-202ENST00000381112 SEL1L2Q5TEA6 688 aa20.61■□□□□ 0.89
CCM2-202ENST00000381112 C4orf50Q6ZRC1 276 aa20.61■□□□□ 0.89
CCM2-202ENST00000381112 C16orf59Q7L2K0 433 aa20.61■□□□□ 0.89
CCM2-202ENST00000381112 CEP57Q86XR8 500 aa20.61■□□□□ 0.89
CCM2-202ENST00000381112 B3GALT6Q96L58 329 aa20.61■□□□□ 0.89
CCM2-202ENST00000381112 NAP1L3Q99457 506 aaPredicted RBP20.61■□□□□ 0.89
CCM2-202ENST00000381112 FNDC1Q4ZHG4 1894 aaPredicted RBP20.6■□□□□ 0.89
CCM2-202ENST00000381112 OR4Q2P0C623 313 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 TKTL1P51854 596 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 RABGGTBP53611 331 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 SLC25A11Q02978 314 aaKnown RBP20.6■□□□□ 0.89
CCM2-202ENST00000381112 LONRF2Q1L5Z9 754 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 CCDC14Q49A88 953 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 FAM117BQ6P1L5 589 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 DCP1BQ8IZD4 617 aaKnown RBP20.6■□□□□ 0.89
CCM2-202ENST00000381112 SIX6OS1Q8N1H7 587 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 PLVAPQ9BX97 442 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 DMAP1Q9NPF5 467 aaPredicted RBP20.6■□□□□ 0.89
CCM2-202ENST00000381112 ASNSD1Q9NWL6 643 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 OR6C75A6NL08 312 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 KRIT1O00522 736 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 NDUFV1P49821 464 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 MRPS5P82675 430 aaKnown RBP20.6■□□□□ 0.89
CCM2-202ENST00000381112 CTXN3Q4LDR2 81 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 SLC39A12Q504Y0 691 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 EFHC1Q5JVL4 640 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 TXNRD3NBQ6F5E7 133 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 ZNF280DQ6N043 979 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 OTOP2Q7RTS6 562 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 GPRIN1Q7Z2K8 1008 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 SPATA2LQ8IUW3 424 aaPredicted RBP20.6■□□□□ 0.89
CCM2-202ENST00000381112 EXD1Q8NHP7 514 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 AP1M1Q9BXS5 423 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 ANKZF1Q9H8Y5 726 aa20.6■□□□□ 0.89
CCM2-202ENST00000381112 RNF8O76064 485 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 FBXO21O94952 628 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 RHOXF2BP0C7M4 288 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 PCK1P35558 622 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 ATP13A4Q4VNC1 1196 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 RTP2Q5QGT7 225 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 TAS1R1Q7RTX1 841 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 POLNQ7Z5Q5 900 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 CMTR2Q8IYT2 770 aaKnown RBP20.59■□□□□ 0.89
CCM2-202ENST00000381112 NDRG1Q92597 394 aaKnown RBP20.59■□□□□ 0.89
CCM2-202ENST00000381112 RHOXF2Q9BQY4 288 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 PNPLA8Q9NP80 782 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 PRKAG2Q9UGJ0 569 aa20.59■□□□□ 0.89
CCM2-202ENST00000381112 TBC1D4O60343 1298 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 ZRANB2O95218 330 aaKnown RBP eCLIP20.58■□□□□ 0.89
CCM2-202ENST00000381112 IL1R2P27930 398 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 GJC1P36383 396 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 PPIGQ13427 754 aaKnown RBP eCLIP20.58■□□□□ 0.89
CCM2-202ENST00000381112 NFE2Q16621 373 aaPredicted RBP20.58■□□□□ 0.89
CCM2-202ENST00000381112 C15orf59Q2T9L4 293 aaPredicted RBP20.58■□□□□ 0.89
CCM2-202ENST00000381112 SH3PXD2AQ5TCZ1 1133 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 SLC13A5Q86YT5 568 aaPredicted RBP20.58■□□□□ 0.89
CCM2-202ENST00000381112 BADQ92934 168 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 IGSF21Q96ID5 467 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 CFAP57Q96MR6 1250 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 TTPALQ9BTX7 342 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 ULBP1Q9BZM6 244 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 CNGB3Q9NQW8 809 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 NR2E1Q9Y466 385 aa20.58■□□□□ 0.89
CCM2-202ENST00000381112 CCDC188H7C350 402 aa20.58■□□□□ 0.88
CCM2-202ENST00000381112 HSF2BPO75031 334 aa20.58■□□□□ 0.88
CCM2-202ENST00000381112 MIPP30301 263 aa20.58■□□□□ 0.88
CCM2-202ENST00000381112 SDC4P31431 198 aa20.58■□□□□ 0.88
CCM2-202ENST00000381112 PTPN9P43378 593 aa20.58■□□□□ 0.88
CCM2-202ENST00000381112 HADHQ16836 314 aaKnown RBP20.58■□□□□ 0.88
CCM2-202ENST00000381112 KCNT2Q6UVM3 1135 aa20.58■□□□□ 0.88
CCM2-202ENST00000381112 RNF168Q8IYW5 571 aaPredicted RBP20.58■□□□□ 0.88
CCM2-202ENST00000381112 ANKRD7Q92527 254 aa20.58■□□□□ 0.88
CCM2-202ENST00000381112 FUBP3Q96I24 572 aaKnown RBP eCLIP20.58■□□□□ 0.88
CCM2-202ENST00000381112 C11orf84Q9BUA3 381 aaPredicted RBP20.58■□□□□ 0.88
CCM2-202ENST00000381112 GLI1P08151 1106 aa20.57■□□□□ 0.88
CCM2-202ENST00000381112 KRT7P08729 469 aa20.57■□□□□ 0.88
CCM2-202ENST00000381112 CYP2F1P24903 491 aa20.57■□□□□ 0.88
CCM2-202ENST00000381112 DAOAP59103 153 aa20.57■□□□□ 0.88
CCM2-202ENST00000381112 BTG3Q14201 252 aaPredicted RBP20.57■□□□□ 0.88
CCM2-202ENST00000381112 ANKS3Q6ZW76 656 aa20.57■□□□□ 0.88
CCM2-202ENST00000381112 RCOR2Q8IZ40 523 aa20.57■□□□□ 0.88
CCM2-202ENST00000381112 DDX23Q9BUQ8 820 aaKnown RBP20.57■□□□□ 0.88
CCM2-202ENST00000381112 VN1R3Q9BXE9 311 aa20.57■□□□□ 0.88
CCM2-202ENST00000381112 DDX56Q9NY93 547 aaKnown RBP20.57■□□□□ 0.88
CCM2-202ENST00000381112 H7C4K7 107 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 FSCN2O14926 492 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 YWHAZP63104 245 aaKnown RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 FPGSQ05932 587 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms