RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 CCNG1P51959 295 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 ZNF143P52747 638 aaPredicted RBP17.04■□□□□ 0.32
VPS16-203ENST00000380469 CDH6P55285 790 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 YWHAGP61981 247 aaKnown RBP eCLIP17.04■□□□□ 0.32
VPS16-203ENST00000380469 FAM47CQ5HY64 1035 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 ZC3H18Q86VM9 953 aaKnown RBP17.04■□□□□ 0.32
VPS16-203ENST00000380469 ZNF276Q8N554 614 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 HEXIM2Q96MH2 286 aaKnown RBP17.04■□□□□ 0.32
VPS16-203ENST00000380469 TUBB6Q9BUF5 446 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 TSSK1BQ9BXA7 367 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 ELOVL4Q9GZR5 314 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 CDT1Q9H211 546 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 TNFSF13BQ9Y275 285 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 OVGP1Q12889 678 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 NOMO1Q15155 1222 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 IGDCC3Q8IVU1 814 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 C1orf127Q8N9H9 656 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 FAM13CQ8NE31 585 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.04■□□□□ 0.32
VPS16-203ENST00000380469 MIEF2Q96C03 454 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 FAF2Q96CS3 445 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 ANKRD27Q96NW4 1050 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 TWNKQ96RR1 684 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 SPATC1LQ9H0A9 340 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 RNPEPL1Q9HAU8 725 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 CYP3A43Q9HB55 503 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 LNPEPQ9UIQ6 1025 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.04■□□□□ 0.32
VPS16-203ENST00000380469 TCRBV9S1A1TA0A576 114 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 LACTBL1A8MY62 500 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 H7C0C1 242 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 FZD9O00144 591 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 CILPO75339 1184 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 HMGCRP04035 888 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 ITGB3P05106 788 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 GJB1P08034 283 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 NFICP08651 508 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 VDRP11473 427 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 GPD1P21695 349 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 ATP5OP48047 213 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 MMRN1Q13201 1228 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 HSDL1Q3SXM5 330 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 ANKRD20A2Q5SQ80 823 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 WASHC2DQ5SRD0 308 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 CELF3Q5SZQ8 465 aaKnown RBP17.03■□□□□ 0.32
VPS16-203ENST00000380469 ANKRD20A1Q5TYW2 823 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 ANKRD20A3Q5VUR7 823 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 NPNTQ6UXI9 565 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 DPH6Q7L8W6 267 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 CLNKQ7Z7G1 428 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 TMEM192Q8IY95 271 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 RFWD2Q8NHY2 731 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 SLC44A1Q8WWI5 657 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 CNPY3Q9BT09 278 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 C12orf65Q9H3J6 166 aaKnown RBP17.03■□□□□ 0.32
VPS16-203ENST00000380469 ALG13Q9NP73 1137 aaKnown RBP17.03■□□□□ 0.32
VPS16-203ENST00000380469 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.03■□□□□ 0.32
VPS16-203ENST00000380469 A0A0G2JND7 137 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 KBTBD13C9JR72 458 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 CHADO15335 359 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 PRPSAP2O60256 369 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 ITGBL1O95965 494 aaPredicted RBP17.03■□□□□ 0.32
VPS16-203ENST00000380469 CALB2P22676 271 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 EPHB2P29323 1055 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 ATICP31939 592 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 GPD2P43304 727 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 KBTBD12Q3ZCT8 623 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 PLEKHG4Q58EX7 1191 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 EFCAB12Q6NXP0 572 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 MAP7D3Q8IWC1 876 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 TRAPPC12Q8WVT3 735 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 APOPT1Q96IL0 206 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 ZNF570Q96NI8 536 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 MIS12Q9H081 205 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 SLC5A4Q9NY91 659 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 HMGXB4Q9UGU5 601 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 TEX264Q9Y6I9 313 aa17.03■□□□□ 0.32
VPS16-203ENST00000380469 E7ENQ6 273 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 ARIH2O95376 493 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 STAG3L1P0CL83 205 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 MBTD1Q05BQ5 628 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 FAAP100Q0VG06 881 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 KRT81Q14533 505 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 KCNJ11Q14654 390 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 JADE1Q6IE81 842 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 CHSY1Q86X52 802 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 UBA3Q8TBC4 463 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 FBXO41Q8TF61 875 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 NUDCD1Q96RS6 583 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 GGA3Q9NZ52 723 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 PAK5Q9P286 719 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 RPL26L1Q9UNX3 145 aaKnown RBP17.02■□□□□ 0.32
VPS16-203ENST00000380469 PPP2R3BQ9Y5P8 575 aa17.02■□□□□ 0.32
VPS16-203ENST00000380469 ENDOD1O94919 500 aa17.02■□□□□ 0.31
VPS16-203ENST00000380469 PYGBP11216 843 aa17.02■□□□□ 0.31
VPS16-203ENST00000380469 PDGFRAP16234 1089 aa17.02■□□□□ 0.31
VPS16-203ENST00000380469 ARFIP2P53365 341 aa17.02■□□□□ 0.31
VPS16-203ENST00000380469 NRLP54845 237 aa17.02■□□□□ 0.31
VPS16-203ENST00000380469 TNFAIP2Q03169 654 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms