RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 STK36Q9NRP7 1315 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 A0A0G2JND7 137 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 INO80B-WBP1J3KQ70 363 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 PSMD12O00232 456 aaPredicted RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 IRS4O14654 1257 aaPredicted RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 FAM58BPP0C7Q3 252 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 CALM1P0DP23 149 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 CALM2P0DP24 149 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 CALM3P0DP25 149 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 KRT10P13645 584 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 IFNAR1P17181 557 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 WDR4P57081 412 aaKnown RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 DSC3Q14574 896 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 HP1BP3Q5SSJ5 553 aaPredicted RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 HGSNATQ68CP4 663 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ZDHHC24Q6UX98 284 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 PIK3AP1Q6ZUJ8 805 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ADAT2Q7Z6V5 191 aaKnown RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 TICAM1Q8IUC6 712 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 CPNE9Q8IYJ1 553 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 SLC26A7Q8TE54 656 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 BCL7CQ8WUZ0 217 aaPredicted RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 TMA16Q96EY4 203 aaKnown RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 METTL2AQ96IZ6 378 aaKnown RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 RUNDC3BQ96NL0 473 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 GREM2Q9H772 168 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 STK17AQ9UEE5 414 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ARFGEF2Q9Y6D5 1785 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 WTIPA6NIX2 430 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-204ENST00000380393 EPHB6O15197 1021 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 RARBP10826 455 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 RFC4P35249 363 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 CBX5P45973 191 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 TNNI2P48788 182 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 COG2Q14746 738 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 KIAA1755Q5JYT7 1200 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 SLFN13Q68D06 897 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 FAM122CQ6P4D5 195 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 EPM2AIP1Q7L775 607 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-204ENST00000380393 GLRX5Q86SX6 157 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 SRBD1Q8N5C6 995 aaKnown RBP9.74□□□□□ -0.85
PTPRA-204ENST00000380393 KRT35Q92764 455 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 MTMR9Q96QG7 549 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTPRA-204ENST00000380393 ARMT1Q9H993 441 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 TFCP2L1Q9NZI6 479 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 PCDHA4Q9UN74 947 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 LAMB4A4D0S4 1761 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 TLR2O60603 784 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 BMP10O95393 424 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 KRT20P35900 424 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 PEX3P56589 373 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 TTC38Q5R3I4 469 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 PPM1LQ5SGD2 360 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 PXDC1Q5TGL8 231 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 UBE2UQ5VVX9 321 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 SH3BP5LQ7L8J4 393 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 C11orf96Q7Z7L8 435 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 ULK2Q8IYT8 1036 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 JDP2Q8WYK2 163 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 PMM1Q92871 262 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 RANBP9Q96S59 729 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF717Q9BY31 904 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-204ENST00000380393 SLC7A8Q9UHI5 535 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 PCDHA12Q9UN75 941 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 APOBEC2Q9Y235 224 aaKnown RBP9.74□□□□□ -0.85
PTPRA-204ENST00000380393 DENRO43583 198 aaKnown RBP9.74□□□□□ -0.85
PTPRA-204ENST00000380393 RPS6KA4O75676 772 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 BMXP51813 675 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 PPP4CP60510 307 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 SNAPC2Q13487 334 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 GK3PQ14409 553 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 ERFEQ4G0M1 354 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 SNX32Q86XE0 403 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 DCP2Q8IU60 420 aaKnown RBP9.74□□□□□ -0.85
PTPRA-204ENST00000380393 GALNT13Q8IUC8 556 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF34Q8IZ26 560 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 HDAC2Q92769 488 aaKnown RBP9.74□□□□□ -0.85
PTPRA-204ENST00000380393 SMYD3Q9H7B4 428 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 WASH6PQ9NQA3 447 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 EBF1Q9UH73 591 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 SLC8A2Q9UPR5 921 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 DNM3Q9UQ16 869 aa9.74□□□□□ -0.85
PTPRA-204ENST00000380393 SBF2Q86WG5 1849 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 FAM47DPA6NHR8 397 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 PSMA7O14818 248 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 MAGEB2O15479 319 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 PRKAB2O43741 272 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 DNAJA2O60884 412 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 FGGP02679 453 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF23P17027 643 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 PTPN9P43378 593 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 IRX4P78413 519 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 MOGQ16653 247 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 TRAPPC3LQ5T215 181 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ZBTB38Q8NAP3 1195 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 RFWD2Q8NHY2 731 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 TBC1D15Q8TC07 691 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ZC3H15Q8WU90 426 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms