RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SLC43A3Q8NBI5 491 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 KCTD6Q8NC69 237 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 HSPH1Q92598 858 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 TXLNGYQ9BZA5 131 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 CYLDQ9NQC7 956 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 ASIC3Q9UHC3 531 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 PLAAQ9Y263 795 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 EFR3BQ9Y2G0 817 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 NEU2Q9Y3R4 380 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 TIMM13Q9Y5L4 95 aaPredicted RBP20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 CLDN5O00501 218 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 LIASO43766 372 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 PPFIA2O75334 1257 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 CD48P09326 243 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 CDR1P51861 262 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 TRAF7Q6Q0C0 670 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 PAQR9Q6ZVX9 377 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 CYP4V2Q6ZWL3 525 aaPredicted RBP20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 TMEM86AQ8N2M4 240 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 GOLGA6L1Q8N7Z2 621 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 UBLCP1Q8WVY7 318 aaPredicted RBP20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 HSFY1Q96LI6 401 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 DUSP16Q9BY84 665 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 DNPEPQ9ULA0 475 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 ATP8A1Q9Y2Q0 1164 aa20.81■□□□□ 0.92
PDLIM5-205ENST00000380180 DPYSL4O14531 572 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 KRT14P02533 472 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 SKIP12755 728 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 IVDP26440 423 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 ACADSBP45954 432 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 LHX1P48742 406 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 BYSLQ13895 437 aaKnown RBP20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 MBTPS1Q14703 1052 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 TAZQ16635 292 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 ECHDC2Q86YB7 292 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 UBN1Q9NPG3 1134 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 WHRNQ9P202 907 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 ADAM21Q9UKJ8 722 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 INPP5FQ9Y2H2 1132 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 TSC2P49815 1807 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 XPO1O14980 1071 aaKnown RBP20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 SDC4P31431 198 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 CALCOCO2Q13137 446 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 MTMR3Q13615 1198 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 ARHGEF6Q15052 776 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 TIGD5Q53EQ6 642 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 MDH1BQ5I0G3 518 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 DRICH1Q6PGQ1 229 aaPredicted RBP20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 RTN4RL1Q86UN2 441 aaPredicted RBP20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 PIGZQ86VD9 579 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 HAUS1Q96CS2 278 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 CRTAC1Q9NQ79 661 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 PRDM10Q9NQV6 1147 aa20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 MTRF1LQ9UGC7 380 aaKnown RBP20.8■□□□□ 0.92
PDLIM5-205ENST00000380180 TP73O15350 636 aa20.79■□□□□ 0.92
PDLIM5-205ENST00000380180 BEST1O76090 585 aa20.79■□□□□ 0.92
PDLIM5-205ENST00000380180 SLC26A9Q7LBE3 791 aa20.79■□□□□ 0.92
PDLIM5-205ENST00000380180 ZNF598Q86UK7 904 aaKnown RBP20.79■□□□□ 0.92
PDLIM5-205ENST00000380180 FAM172AQ8WUF8 416 aa20.79■□□□□ 0.92
PDLIM5-205ENST00000380180 NGRNQ9NPE2 291 aaKnown RBP20.79■□□□□ 0.92
PDLIM5-205ENST00000380180 PTCH2Q9Y6C5 1203 aa20.79■□□□□ 0.92
PDLIM5-205ENST00000380180 H0YGN5 161 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 PRPSAP2O60256 369 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 CST8O60676 142 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 B3GAT3O94766 335 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 ITIH2P19823 946 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 DYNLT1P63172 113 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 LMNB2Q03252 620 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 GRIK3Q13003 919 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 SCYL2Q6P3W7 929 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 ZNF365Q70YC5 407 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 GSTA5Q7RTV2 222 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 ARL8AQ96BM9 186 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 SNF8Q96H20 258 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 MED10Q9BTT4 135 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 RGS18Q9NS28 235 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 SAE1Q9UBE0 346 aaPredicted RBP20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 ZNF148Q9UQR1 794 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 NFS1Q9Y697 457 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 GOLGA8KD6RF30 607 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 I3L4J1 428 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 NPR3P17342 541 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 SCNN1AP37088 669 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 ADCY8P40145 1251 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 PRMT2P55345 433 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 SLC8A3P57103 927 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 PAN2Q504Q3 1202 aaKnown RBP20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 SYT15Q9BQS2 421 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 CALN1Q9BXU9 219 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 FAM129AQ9BZQ8 928 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 FAM204AQ9H8W3 233 aa20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 DRG1Q9Y295 367 aaKnown RBP20.78■□□□□ 0.92
PDLIM5-205ENST00000380180 ARVCFO00192 962 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 ENDOD1O94919 500 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 VPS41P49754 854 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 PLCB3Q01970 1234 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 TUSC3Q13454 348 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 LRIG3Q6UXM1 1119 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms