RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 ZNF786Q8N393 782 aa16.51■□□□□ 0.23
KCNC1-202ENST00000379472 UTP15Q8TED0 518 aaKnown RBP16.51■□□□□ 0.23
KCNC1-202ENST00000379472 TPD52L3Q96J77 140 aa16.51■□□□□ 0.23
KCNC1-202ENST00000379472 PIGHQ14442 188 aaPredicted RBP16.51■□□□□ 0.23
KCNC1-202ENST00000379472 ABCG4Q9H172 646 aa16.51■□□□□ 0.23
KCNC1-202ENST00000379472 GOLPH3Q9H4A6 298 aa16.51■□□□□ 0.23
KCNC1-202ENST00000379472 DNALI1O14645 258 aaPredicted RBP16.51■□□□□ 0.23
KCNC1-202ENST00000379472 ACADLP28330 430 aa16.51■□□□□ 0.23
KCNC1-202ENST00000379472 SARSP49591 514 aaKnown RBP16.51■□□□□ 0.23
KCNC1-202ENST00000379472 SCRN3Q0VDG4 424 aa16.51■□□□□ 0.23
KCNC1-202ENST00000379472 TMEM260Q9NX78 707 aa16.51■□□□□ 0.23
KCNC1-202ENST00000379472 TSPAN9O75954 239 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 ZNF23P17027 643 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 ATP6V1B2P21281 511 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 PTPN3P26045 913 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 ARF3P61204 181 aaPredicted RBP16.5■□□□□ 0.23
KCNC1-202ENST00000379472 ARF1P84077 181 aaKnown RBP16.5■□□□□ 0.23
KCNC1-202ENST00000379472 ARL6IP4Q66PJ3 421 aaKnown RBP16.5■□□□□ 0.23
KCNC1-202ENST00000379472 PMM1Q92871 262 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 RMND5BQ96G75 393 aaPredicted RBP16.5■□□□□ 0.23
KCNC1-202ENST00000379472 MLH3Q9UHC1 1453 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 EDC4Q6P2E9 1401 aaKnown RBP16.5■□□□□ 0.23
KCNC1-202ENST00000379472 TFB1MQ8WVM0 346 aaKnown RBP16.5■□□□□ 0.23
KCNC1-202ENST00000379472 SLC35C2Q9NQQ7 365 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 ZMYND11Q15326 602 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 KLK14Q9P0G3 267 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 MTA2O94776 668 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 SLC2A3P11169 496 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 ZNF671Q8TAW3 534 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 SUCOQ9UBS9 1254 aaKnown RBP16.5■□□□□ 0.23
KCNC1-202ENST00000379472 MAGEB2O15479 319 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 TRIM3O75382 744 aaPredicted RBP16.5■□□□□ 0.23
KCNC1-202ENST00000379472 MIB1Q86YT6 1006 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 IL13P35225 146 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 EIF2S3P41091 472 aaKnown RBP16.5■□□□□ 0.23
KCNC1-202ENST00000379472 MRNIPQ6NTE8 343 aa16.5■□□□□ 0.23
KCNC1-202ENST00000379472 RCVRNP35243 200 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 SKIV2L2P42285 1042 aaKnown RBP16.49■□□□□ 0.23
KCNC1-202ENST00000379472 KYNUQ16719 465 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 MGRN1O60291 552 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 GGCXP38435 758 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 PTGER2P43116 358 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 PTK7Q13308 1070 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 STAT4Q14765 748 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 DSELQ8IZU8 1212 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 OMA1Q96E52 524 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 OMDQ99983 421 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 SYNPO2Q9UMS6 1093 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 SF3B1O75533 1304 aaKnown RBP eCLIP16.49■□□□□ 0.23
KCNC1-202ENST00000379472 TRIM49BA6NDI0 452 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 TCEA3O75764 348 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 IL18RAPO95256 599 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 SLC1A1P43005 524 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 NUP107P57740 925 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 SMTNL2Q2TAL5 461 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 CDH24Q86UP0 819 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 RACGAP1Q9H0H5 632 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 COL17A1Q9UMD9 1497 aaPredicted RBP16.49■□□□□ 0.23
KCNC1-202ENST00000379472 USP18Q9UMW8 372 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 TRPC5OSA6NMA1 111 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 SUPT7LO94864 414 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 LYNP07948 512 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 BNC1Q01954 994 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 NAPEPLDQ6IQ20 393 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 ITIH5Q86UX2 942 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 PARP9Q8IXQ6 854 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 ADGRE3Q9BY15 652 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.49■□□□□ 0.23
KCNC1-202ENST00000379472 TRAF2Q12933 501 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 CCSAPQ6IQ19 270 aaPredicted RBP16.49■□□□□ 0.23
KCNC1-202ENST00000379472 DHX40Q8IX18 779 aaKnown RBP16.49■□□□□ 0.23
KCNC1-202ENST00000379472 TRPV3Q8NET8 790 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 ATL2Q8NHH9 583 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 C18orf25Q96B23 403 aaPredicted RBP16.49■□□□□ 0.23
KCNC1-202ENST00000379472 CPVLQ9H3G5 476 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 CDY2AQ9Y6F7 541 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 CDY1Q9Y6F8 540 aa16.49■□□□□ 0.23
KCNC1-202ENST00000379472 ANXA9O76027 345 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 THOP1P52888 689 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 STXBP1P61764 594 aaKnown RBP16.48■□□□□ 0.23
KCNC1-202ENST00000379472 SLC45A4Q5BKX6 768 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 EFHC1Q5JVL4 640 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 CASP12Q6UXS9 341 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 C11orf57Q6ZUT1 292 aaPredicted RBP16.48■□□□□ 0.23
KCNC1-202ENST00000379472 KRT73Q86Y46 540 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 ARRDC4Q8NCT1 418 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 PUS7LQ9H0K6 701 aaKnown RBP16.48■□□□□ 0.23
KCNC1-202ENST00000379472 DDX47Q9H0S4 455 aaKnown RBP16.48■□□□□ 0.23
KCNC1-202ENST00000379472 BTBD3Q9Y2F9 522 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 SYCP2Q9BX26 1530 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 NCK2O43639 380 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 MYL12AP19105 171 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 WARSP23381 471 aaKnown RBP16.48■□□□□ 0.23
KCNC1-202ENST00000379472 PDHA2P29803 388 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 CHRNB3Q05901 458 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 XRCC4Q13426 336 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 SGF29Q96ES7 293 aa16.48■□□□□ 0.23
KCNC1-202ENST00000379472 HERC5Q9UII4 1024 aaKnown RBP16.48■□□□□ 0.23
KCNC1-202ENST00000379472 AXIN2Q9Y2T1 843 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms