RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CLPBQ9H078 707 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 FGRP09769 529 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 COPAP53621 1224 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 PAICSP22234 425 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 AVPR1AP37288 418 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 RFX8Q6ZV50 586 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 MYO1HQ8N1T3 1032 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 VTI1BQ9UEU0 232 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 PTGES3Q15185 160 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 GNASQ5JWF2 1037 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 LMBRD2Q68DH5 695 aaPredicted RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 APLFQ8IW19 511 aaPredicted RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 CARNMT1Q8N4J0 409 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 RAD21L1Q9H4I0 556 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 PCDHB6Q9Y5E3 794 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 RRN3P2A6NIE6 340 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 EXTL3O43909 919 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 KLC1Q07866 573 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 RBBP4Q09028 425 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 CSGALNACT1Q8TDX6 532 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 INTS2Q9H0H0 1204 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 PDGFCQ9NRA1 345 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 INTS7Q9NVH2 962 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 ERBB3P21860 1342 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 QRICH2Q9H0J4 1663 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 KRT34O76011 436 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 PTPN7P35236 360 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 MLH1P40692 756 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 GTF2A2P52657 109 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 TRAPPC11Q7Z392 1133 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 SUCOQ9UBS9 1254 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 DCDC2CA8MYV0 355 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 CETPP11597 493 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 CCR4P51679 360 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 BBS4Q96RK4 519 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 CAAP1Q9H8G2 361 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 CRYL1Q9Y2S2 319 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 MTA1Q13330 715 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 NFIL3Q16649 462 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 PFKFB3Q16875 520 aaPredicted RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 RESP18Q5W5W9 173 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 MAP4K1Q92918 833 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 NEK5Q6P3R8 708 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 FBXO32Q969P5 355 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 SCNN1BP51168 640 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 TBCDQ9BTW9 1192 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 OR6A2O95222 327 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 HLA-DQA2P01906 255 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 CENPCQ03188 943 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 PDZK1Q5T2W1 519 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 POTEGQ6S5H5 508 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 PRMT7Q9NVM4 692 aaPredicted RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 KANSL1LA0AUZ9 987 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 TMEM114B3SHH9 223 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 RAB2AP61019 212 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 PPIL2Q13356 520 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 KLHL17Q6TDP4 642 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 FAM220AQ7Z4H9 259 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 PRPF39Q86UA1 669 aaKnown RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 MCOLN3Q8TDD5 553 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 SSH3Q8TE77 659 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 GLMNQ92990 594 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 KCTD14Q9BQ13 255 aaPredicted RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 SAMSN1Q9NSI8 373 aaKnown RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 SPHKAPQ2M3C7 1700 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 RTN2O75298 545 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 SLC25A41Q8N5S1 370 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 KCTD17Q8N5Z5 321 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 MCEEQ96PE7 176 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 GNRH1P01148 92 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 ADGRF4Q8IZF3 695 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 LRRC71Q8N4P6 559 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 FRMD6Q96NE9 622 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 MARCOQ9UEW3 520 aaPredicted RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 PRKAG3Q9UGI9 489 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 EFCAB6Q5THR3 1501 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 NACAE9PAV3 2078 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 VAV1P15498 845 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 THPOP40225 353 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 SNRPFP62306 86 aaKnown RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 EFHC1Q5JVL4 640 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 ARMC3Q5W041 872 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 FRMD8Q9BZ67 464 aaPredicted RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 WDCPQ9H6R7 721 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 ALG13Q9NP73 1137 aaKnown RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 CDK5RAP2Q96SN8 1893 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 CKMP06732 381 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 HSMCR30P0CW71 290 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 RIBC2Q9H4K1 309 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 CDC42BPBQ9Y5S2 1711 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 A0A087WZ62 844 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 STX11O75558 287 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 LRRC74BQ6ZQY2 392 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 GPR141Q7Z602 305 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 MTO1Q9Y2Z2 717 aaKnown RBP11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 IFNAR1P17181 557 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 PTK7Q13308 1070 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 GRID1Q9ULK0 1009 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms