RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 SALL4Q9UJQ4 1053 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 TBKBP1A7MCY6 615 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 EEF2KO00418 725 aaKnown RBP15.03■□□□□ -0
PRDM16-203ENST00000378391 SKAP2O75563 359 aaPredicted RBP15.03■□□□□ -0
PRDM16-203ENST00000378391 MSL3P1P0C860 447 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 PUDPQ08623 228 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 ADRM1Q16186 407 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 RRM2BQ7LG56 351 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 CCDC103Q8IW40 242 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 ATP6V1HQ9UI12 483 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 RABL2BQ9UNT1 228 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 DTNAQ9Y4J8 743 aa15.03■□□□□ -0
PRDM16-203ENST00000378391 PYGLP06737 847 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 OVGP1Q12889 678 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 SMTNL2Q2TAL5 461 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 CDC42EP5Q6NZY7 148 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 LRRC55Q6ZSA7 311 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 ATPAF2Q8N5M1 289 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 ILKAPQ9H0C8 392 aaPredicted RBP15.02■□□□□ -0
PRDM16-203ENST00000378391 CHORDC1Q9UHD1 332 aaPredicted RBP15.02■□□□□ -0
PRDM16-203ENST00000378391 TRPC5OSA6NMA1 111 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 S100A5P33763 92 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 PRKCEQ02156 737 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 PLA2G4FQ68DD2 849 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 EFL1Q7Z2Z2 1120 aaKnown RBP15.02■□□□□ -0
PRDM16-203ENST00000378391 INPP4AQ96PE3 977 aaPredicted RBP15.02■□□□□ -0
PRDM16-203ENST00000378391 NUDT12Q9BQG2 462 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 SMARCAD1Q9H4L7 1026 aa15.02■□□□□ -0
PRDM16-203ENST00000378391 CYTH3O43739 400 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 GLRA3O75311 464 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 CALB2P22676 271 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 PAX3P23760 479 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 PTENP60484 403 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 TSC22D1Q15714 1073 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 PLD3Q8IV08 490 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 PI4K2AQ9BTU6 479 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 IL1RAPL1Q9NZN1 696 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 TJP2Q9UDY2 1190 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 MAGEB2O15479 319 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 CDC40O60508 579 aaKnown RBP eCLIP15.02□□□□□ -0.018e-9■■□□□ 12.8
PRDM16-203ENST00000378391 TXNP10599 105 aaKnown RBP15.02□□□□□ -0.01
PRDM16-203ENST00000378391 NNMTP40261 264 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 MTM1Q13496 603 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 KRT72Q14CN4 511 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 NAPEPLDQ6IQ20 393 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 URGCPQ8TCY9 931 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 SLC24A2Q9UI40 661 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 TBX20Q9UMR3 447 aa15.02□□□□□ -0.01
PRDM16-203ENST00000378391 ZC3H11AO75152 810 aaKnown RBP eCLIP15.01□□□□□ -0.01
PRDM16-203ENST00000378391 TCN1P20061 433 aaPredicted RBP15.01□□□□□ -0.01
PRDM16-203ENST00000378391 PTGER2P43116 358 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 EVX2Q03828 476 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 ZNF669Q96BR6 464 aaPredicted RBP15.01□□□□□ -0.01
PRDM16-203ENST00000378391 MIEF2Q96C03 454 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 M0R3G1 203 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 THRAP10827 490 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 TUBA1BP68363 451 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 MCL1Q07820 350 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 CUL2Q13617 745 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 EFHC1Q5JVL4 640 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 TUBA1AQ71U36 451 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 SHCBP1Q8NEM2 672 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 PRPF18Q99633 342 aaKnown RBP15.01□□□□□ -0.01
PRDM16-203ENST00000378391 RXFP1Q9HBX9 757 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 KCNH7Q9NS40 1196 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 MSH4O15457 936 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 BAIAP3O94812 1187 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 IFI35P80217 286 aaPredicted RBP15.01□□□□□ -0.01
PRDM16-203ENST00000378391 PTK2BQ14289 1009 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 DMC1Q14565 340 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 OTUB1Q96FW1 271 aaPredicted RBP15.01□□□□□ -0.01
PRDM16-203ENST00000378391 B3GALT6Q96L58 329 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 NAT9Q9BTE0 207 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 SEMA4AQ9H3S1 761 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 CRYBG1Q9Y4K1 1723 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 TAF4O00268 1085 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 ZSCAN9O15535 394 aaPredicted RBP15.01□□□□□ -0.01
PRDM16-203ENST00000378391 GRAP2O75791 330 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 KRT20P35900 424 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 FDFT1P37268 417 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 KDELC2Q7Z4H8 507 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 TAGAPQ8N103 731 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 TCAIMQ8N3R3 496 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 C1orf131Q8NDD1 294 aaKnown RBP15.01□□□□□ -0.01
PRDM16-203ENST00000378391 ATG4AQ8WYN0 398 aa15.01□□□□□ -0.01
PRDM16-203ENST00000378391 C4BPBP20851 252 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 CCNCP24863 283 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 CASP4P49662 377 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 HMGCS2P54868 508 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 KCNK18Q7Z418 384 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 SCUBE1Q8IWY4 988 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 KLHL20Q9Y2M5 609 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 NDUFS3O75489 264 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 CD4P01730 458 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 CYP2C8P10632 490 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 ZNF280DQ6N043 979 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 PPP1R3FQ6ZSY5 799 aaPredicted RBP15□□□□□ -0.01
PRDM16-203ENST00000378391 SGPL1O95470 568 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 PTPN4P29074 926 aa15□□□□□ -0.01
PRDM16-203ENST00000378391 CCNG2Q16589 344 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms