RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 CBFA2T2O43439 604 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 MED7O43513 233 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 MOSPD3O75425 235 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 YWHAQP27348 245 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 PBX1P40424 430 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 PDE6CP51160 858 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 TJAP1Q5JTD0 557 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 PRSS36Q5K4E3 855 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 PMF1Q6P1K2 205 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 NOP9Q86U38 636 aaKnown RBP12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 MAB21L3Q8N8X9 362 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 SLC20A1Q8WUM9 679 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 TRPC7Q9HCX4 862 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 LIMD1Q9UGP4 676 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 ZNF197O14709 1029 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 SLC34A2O95436 690 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 USP17L7P0C7H9 530 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 LCP1P13796 627 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 PGFP49763 221 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 TKTL1P51854 596 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 OTOP3Q7RTS5 596 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 ADAMTS19Q8TE59 1207 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 EPS8L1Q8TE68 723 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 BAP1Q92560 729 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 FBXO32Q969P5 355 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 ACSF2Q96CM8 615 aaPredicted RBP12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 MYRFLQ96LU7 910 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 SLITRK1Q96PX8 696 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 GCNAQ96QF7 691 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 CYP2S1Q96SQ9 504 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 SMG9Q9H0W8 520 aaKnown RBP12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 PAPLNO95428 1278 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 F11P03951 625 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 ASGR2P07307 311 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 MMEP08473 750 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 POU2F2P09086 479 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 LAMP2P13473 410 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 CASP14P31944 242 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 GPD2P43304 727 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 EPHA5P54756 1037 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 BPIFB4P59827 614 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 ZP2Q05996 745 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 ADIGQ0VDE8 80 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 PKDCCQ504Y2 493 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 GPR158Q5T848 1215 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 ADHFE1Q8IWW8 467 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 TDRD5Q8NAT2 981 aaKnown RBP12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 SLC35F5Q8WV83 523 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 RSAD2Q8WXG1 361 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 TTYH3Q9C0H2 523 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 MIS12Q9H081 205 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 LRRC4Q9HBW1 653 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 CD320Q9NPF0 282 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 SEPT11Q9NVA2 429 aaKnown RBP12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 UXTQ9UBK9 157 aaPredicted RBP12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 CYTH4Q9UIA0 394 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 NUDT5Q9UKK9 219 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 CDH7Q9ULB5 785 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 C2orf78A6NCI8 922 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 XPO1O14980 1071 aaKnown RBP12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 TADA3O75528 432 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 GYPCP04921 128 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 KIF11P52732 1056 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 GOLGA8FQ08AF8 430 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 GOLGA8DPQ0D2H9 430 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 STILQ15468 1287 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 C2CD6Q53TS8 623 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 E4F1Q66K89 784 aaPredicted RBP12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 SPECC1LQ69YQ0 1117 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 SCUBE3Q8IX30 993 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 C1orf131Q8NDD1 294 aaKnown RBP12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 MRPS31Q92665 395 aaKnown RBP12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 TRMT2BQ96GJ1 504 aaKnown RBP12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 SLC22A12Q96S37 553 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 TRPM5Q9NZQ8 1165 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 GMIPQ9P107 970 aa12.36□□□□□ -0.43
DEPDC4-202ENST00000378244 CUL9Q8IWT3 2517 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 NOTCH4Q99466 2003 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 RTN3O95197 1032 aaPredicted RBP12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 SETSIPP0DME0 302 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 CDC25CP30307 473 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 SIX6OS1Q8N1H7 587 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 WDTC1Q8N5D0 677 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 ZSCAN18Q8TBC5 510 aaPredicted RBP12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 SLC46A2Q9BY10 475 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 ULBP1Q9BZM6 244 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 TJP2Q9UDY2 1190 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 NR2E1Q9Y466 385 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 PTPRDP23468 1912 aa12.35□□□□□ -0.43
DEPDC4-202ENST00000378244 ZNF840PA6NDX5 716 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 GABBR2O75899 941 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 SKILP12757 684 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 VIPR2P41587 438 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 PLA2G4AP47712 749 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 FAM78AQ5JUQ0 283 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 PARM1Q6UWI2 310 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 VSTM4Q8IW00 320 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms