RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 RASA2Q15283 850 aa17.35■□□□□ 0.37
PCDHA1-201ENST00000378133 GSTA3Q16772 222 aa17.35■□□□□ 0.37
PCDHA1-201ENST00000378133 SMTNL2Q2TAL5 461 aa17.35■□□□□ 0.37
PCDHA1-201ENST00000378133 UBR7Q8N806 425 aa17.35■□□□□ 0.37
PCDHA1-201ENST00000378133 ZNF280CQ8ND82 737 aa17.35■□□□□ 0.37
PCDHA1-201ENST00000378133 TSSK1BQ9BXA7 367 aa17.35■□□□□ 0.37
PCDHA1-201ENST00000378133 VPS11Q9H270 941 aa17.35■□□□□ 0.37
PCDHA1-201ENST00000378133 GINM1Q9NU53 330 aa17.35■□□□□ 0.37
PCDHA1-201ENST00000378133 MTO1Q9Y2Z2 717 aaKnown RBP17.35■□□□□ 0.37
PCDHA1-201ENST00000378133 ITGAVP06756 1048 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 SSTR1P30872 391 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 PGM1P36871 562 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 GPX6P59796 221 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 CDK16Q00536 496 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 USP4Q13107 963 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 PIGHQ14442 188 aaPredicted RBP17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 KCNT1Q5JUK3 1230 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 PRAMEF18Q5VWM3 479 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 SAMD7Q7Z3H4 446 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 SESTD1Q86VW0 696 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 TFAP2BQ92481 460 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 NKD2Q969F2 451 aaPredicted RBP17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 TMEM120AQ9BXJ8 343 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 SLC17A7Q9P2U7 560 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 A8MXQ7 604 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 DNAJC6O75061 913 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 CAPSQ13938 189 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 SCARA5Q6ZMJ2 495 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 ARHGAP24Q8N264 748 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 SKA1Q96BD8 255 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 NR1H4Q96RI1 486 aaPredicted RBP17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 KLF6Q99612 283 aaPredicted RBP17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 ACAD9Q9H845 621 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 ZWILCHQ9H900 591 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 PCDH9Q9HC56 1237 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 DMAP1Q9NPF5 467 aaPredicted RBP17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 AGTPBP1Q9UPW5 1226 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 LYNP07948 512 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 GDF10P55107 478 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 KRT72Q14CN4 511 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 EFTUD2Q15029 972 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 HIF1AQ16665 826 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 EFHC2Q5JST6 749 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 ANKRD22Q5VYY1 191 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 VPS33BQ9H267 617 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 KCNK13Q9HB14 408 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 ANGPTL2Q9UKU9 493 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 SHOC2Q9UQ13 582 aa17.34■□□□□ 0.37
PCDHA1-201ENST00000378133 TM9SF1O15321 606 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 ATG7O95352 703 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 RARBP10826 455 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 AMPD1P23109 780 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 RFC1P35251 1148 aaPredicted RBP17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 NEK3P51956 506 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 TFDP1Q14186 410 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 MSS51Q4VC12 460 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 BRSK2Q8IWQ3 736 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 SLC35B2Q8TB61 432 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 ACTL9Q8TC94 416 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 TEX13BQ9BXU2 312 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 DDX56Q9NY93 547 aaKnown RBP17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 RABGEF1Q9UJ41 708 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 PARP14Q460N5 1801 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 ADCY3O60266 1144 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 LSM8O95777 96 aaKnown RBP17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 PTPRAP18433 802 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 OAZ1P54368 228 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 OTUD4Q01804 1114 aaKnown RBP17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 FNBP1LQ5T0N5 605 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 ARHGAP18Q8N392 663 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 PYROXD1Q8WU10 500 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 FAM161BQ96MY7 647 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 TMEM134Q9H6X4 195 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 DDX43Q9NXZ2 648 aaKnown RBP17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 TJP2Q9UDY2 1190 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 ADAMTS5Q9UNA0 930 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 CLUHO75153 1309 aa17.33■□□□□ 0.36
PCDHA1-201ENST00000378133 C2orf71A6NGG8 1288 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 STAM2O75886 525 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 CNTN2Q02246 1040 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 MTA1Q13330 715 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 STXBP2Q15833 593 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 C3orf62Q6ZUJ4 267 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 TTC7BQ86TV6 843 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 WRNIP1Q96S55 665 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 ASCC2Q9H1I8 757 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 HACL1Q9UJ83 578 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 FARP1Q9Y4F1 1045 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 C3orf70A6NLC5 250 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 CST8O60676 142 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 PSMA2P25787 234 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 IL1R2P27930 398 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 PTPN7P35236 360 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 WDR49Q8IV35 697 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 BANPQ8N9N5 519 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 KCNN1Q92952 543 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 NIFKQ9BYG3 293 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 NIF3L1Q9GZT8 377 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 PICK1Q9NRD5 415 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms