RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 DSG4Q86SJ6 1040 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 IZUMO1Q8IYV9 350 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 UCMAQ8WVF2 138 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 COL26A1Q96A83 441 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 CELF6Q96J87 481 aaKnown RBP16.88■□□□□ 0.29
RGP1-201ENST00000378078 ATXN3LQ9H3M9 355 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 TEX28O15482 410 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 PTK6Q13882 451 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 PDK1Q15118 436 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 ADGRF2Q8IZF7 708 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 FRMD6Q96NE9 622 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 KLHL25Q9H0H3 589 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.88■□□□□ 0.29
RGP1-201ENST00000378078 KRT75O95678 551 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 RHOCP08134 193 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 ZNF23P17027 643 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 SCNN1BP51168 640 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 TRAF2Q12933 501 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 NECAB2Q7Z6G3 386 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.88■□□□□ 0.29
RGP1-201ENST00000378078 PSMC3IPQ9P2W1 217 aaPredicted RBP16.88■□□□□ 0.29
RGP1-201ENST00000378078 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 STAG3L1P0CL83 205 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 TAF6P49848 677 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 RHOAP61586 193 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 BOP1Q14137 746 aaKnown RBP16.88■□□□□ 0.29
RGP1-201ENST00000378078 RBM23Q86U06 439 aaKnown RBP16.88■□□□□ 0.29
RGP1-201ENST00000378078 SCFD2Q8WU76 684 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 MYOCQ99972 504 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 CTCFP49711 727 aaPredicted RBP16.88■□□□□ 0.29
RGP1-201ENST00000378078 PALB2Q86YC2 1186 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 DPP10Q8N608 796 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 PIK3R5Q8WYR1 880 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 SYBUQ9NX95 663 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 SPATA2Q9UM82 520 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 TRIM13O60858 407 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 SOAT2O75908 522 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 IL18RAPO95256 599 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 COMTP21964 271 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 CCNG1P51959 295 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 C9orf131Q5VYM1 1079 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 HLA-DQA1Q5Y7H0 255 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 STAMBPL1Q96FJ0 436 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 OLFML3Q9NRN5 406 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 GPRC5DQ9NZD1 345 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 KDM5CP41229 1560 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 IFRD1O00458 451 aaPredicted RBP16.87■□□□□ 0.29
RGP1-201ENST00000378078 CHUKO15111 745 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 KCNA3P22001 575 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 TRIP10Q15642 601 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 SH3GL2Q99962 352 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 HERC5Q9UII4 1024 aaKnown RBP16.87■□□□□ 0.29
RGP1-201ENST00000378078 ALBP02768 609 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 NR3C2P08235 984 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 SPRP35270 261 aaPredicted RBP16.87■□□□□ 0.29
RGP1-201ENST00000378078 CYP20A1Q6UW02 462 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 ISLR2Q6UXK2 745 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 USP7Q93009 1102 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 RIC8BQ9NVN3 520 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 SIK3Q9Y2K2 1263 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 DAGLAQ9Y4D2 1042 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 USP11P51784 963 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 MAPK10P53779 464 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 PLD1Q13393 1074 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 SHC4Q6S5L8 630 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 LRRC74BQ6ZQY2 392 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 LNPEPQ9UIQ6 1025 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 ADGBQ8N7X0 1667 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 H7C1W4 665 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 PSMC6P62333 389 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 AHI1Q8N157 1196 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 TSC22D4Q9Y3Q8 395 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 GPR182O15218 404 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 LY6KQ17RY6 165 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 CCDC144BQ3MJ40 725 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 UTS2BQ765I0 119 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 LPCAT1Q8NF37 534 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 MDM1Q8TC05 714 aa16.87■□□□□ 0.29
RGP1-201ENST00000378078 UTP15Q8TED0 518 aaKnown RBP16.87■□□□□ 0.29
RGP1-201ENST00000378078 IRX2Q9BZI1 471 aaPredicted RBP16.87■□□□□ 0.29
RGP1-201ENST00000378078 B2RBV5 119 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 CTSEP14091 401 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 CCNIQ14094 377 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 MYO1HQ8N1T3 1032 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 LINC00116Q8NCU8 138 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 TNIP2Q8NFZ5 429 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
RGP1-201ENST00000378078 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 FAM124AQ86V42 546 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 ZNF333Q96JL9 665 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 TLR8Q9NR97 1041 aaKnown RBP16.86■□□□□ 0.29
RGP1-201ENST00000378078 GRID2IPA4D2P6 1211 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 LRRC14BA6NHZ5 514 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 SLC1A1P43005 524 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 MTFR1Q15390 333 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 DNAAF5Q86Y56 855 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 ADAM32Q8TC27 787 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 PHF21BQ96EK2 531 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 MANSC1Q9H8J5 431 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 EXTL3O43909 919 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms