RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 RBP3P10745 1247 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 CCND2P30279 289 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 RAP1GAPP47736 663 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 TGFB2P61812 414 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 OCRLQ01968 901 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 ENPEPQ07075 957 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 BIRC2Q13490 618 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 SH3PXD2AQ5TCZ1 1133 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 FAXCQ5TGI0 409 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 ABHD15Q6UXT9 468 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 BBS12Q6ZW61 710 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 SLC25A41Q8N5S1 370 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 SLC44A1Q8WWI5 657 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 SRPK1Q96SB4 655 aaKnown RBP18.8■□□□□ 0.6
GNE-201ENST00000377902 IMPG2Q9BZV3 1241 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 RPAP3Q9H6T3 665 aaPredicted RBP18.8■□□□□ 0.6
GNE-201ENST00000377902 STX18Q9P2W9 335 aaKnown RBP18.8■□□□□ 0.6
GNE-201ENST00000377902 RGPD3A6NKT7 1758 aaPredicted RBP18.79■□□□□ 0.6
GNE-201ENST00000377902 RGPD4Q7Z3J3 1758 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 IQANK1A0A1B0GTG1 560 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 AHCYL1O43865 530 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 TOP3BO95985 862 aaKnown RBP18.79■□□□□ 0.6
GNE-201ENST00000377902 SKIP12755 728 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 KCNA3P22001 575 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 RXRBP28702 533 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 PPM1NQ8N819 430 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 RBM15BQ8NDT2 890 aaKnown RBP18.79■□□□□ 0.6
GNE-201ENST00000377902 SPATA18Q8TC71 538 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 C20orf27Q9GZN8 174 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 ADGRA2Q96PE1 1338 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 TRIM49D1C9J1S8 452 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 CACNA2D1P54289 1103 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 SLC18A2Q05940 514 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 AP1B1Q10567 949 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 BMPR2Q13873 1038 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 ARID3BQ8IVW6 561 aaPredicted RBP18.79■□□□□ 0.6
GNE-201ENST00000377902 NIPA2Q8N8Q9 360 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 ACAP3Q96P50 834 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 ZCWPW1Q9H0M4 648 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 PPARGC1AQ9UBK2 798 aaKnown RBP18.79■□□□□ 0.6
GNE-201ENST00000377902 PGAP2Q9UHJ9 254 aa18.79■□□□□ 0.6
GNE-201ENST00000377902 PIK3R2O00459 728 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 ONECUT3O60422 494 aaPredicted RBP18.78■□□□□ 0.6
GNE-201ENST00000377902 ZCCHC18P0CG32 403 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 CD19P15391 556 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 KRT72Q14CN4 511 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 CHSY1Q86X52 802 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.78■□□□□ 0.6
GNE-201ENST00000377902 RDM1Q8NG50 284 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 TCHPQ9BT92 498 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 SCOCQ9UIL1 159 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 POLIQ9UNA4 740 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 TEX264Q9Y6I9 313 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 USP1O94782 785 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 TGDSO95455 350 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 POLE2P56282 527 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 PSMC1P62191 440 aaKnown RBP18.78■□□□□ 0.6
GNE-201ENST00000377902 BST1Q10588 318 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 GPRASP2Q96D09 838 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 IFT43Q96FT9 208 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 CPXM1Q96SM3 734 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 GMLQ99445 158 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 TUBB6Q9BUF5 446 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 PORCNQ9H237 461 aa18.78■□□□□ 0.6
GNE-201ENST00000377902 NXF1Q9UBU9 619 aaKnown RBP18.78■□□□□ 0.6
GNE-201ENST00000377902 VWA5AO00534 786 aa18.77■□□□□ 0.6
GNE-201ENST00000377902 COPEO14579 308 aa18.77■□□□□ 0.6
GNE-201ENST00000377902 ABLIM1O14639 778 aa18.77■□□□□ 0.6
GNE-201ENST00000377902 LSM8O95777 96 aaKnown RBP18.77■□□□□ 0.6
GNE-201ENST00000377902 CDH8P55286 799 aa18.77■□□□□ 0.6
GNE-201ENST00000377902 FSTL1Q12841 308 aa18.77■□□□□ 0.6
GNE-201ENST00000377902 STYK1Q6J9G0 422 aa18.77■□□□□ 0.6
GNE-201ENST00000377902 ZNF668Q96K58 619 aaPredicted RBP18.77■□□□□ 0.6
GNE-201ENST00000377902 PANX3Q96QZ0 392 aa18.77■□□□□ 0.6
GNE-201ENST00000377902 THTPAQ9BU02 230 aa18.77■□□□□ 0.6
GNE-201ENST00000377902 VCXQ9H320 206 aa18.77■□□□□ 0.6
GNE-201ENST00000377902 MAP3K7O43318 606 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 MIPP30301 263 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 ALDH18A1P54886 795 aaKnown RBP18.77■□□□□ 0.59
GNE-201ENST00000377902 OSTNP61366 133 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 MRPS5P82675 430 aaKnown RBP18.77■□□□□ 0.59
GNE-201ENST00000377902 TMPRSS15P98073 1019 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 XKR3Q5GH77 459 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 SLFN12LQ6IEE8 588 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 DARS2Q6PI48 645 aaKnown RBP18.77■□□□□ 0.59
GNE-201ENST00000377902 ZCCHC23Q6ZST2 131 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 POLNQ7Z5Q5 900 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 GATA6Q92908 595 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 TTC1Q99614 292 aa18.77■□□□□ 0.59
GNE-201ENST00000377902 ZNF277Q9NRM2 450 aaPredicted RBP18.77■□□□□ 0.59
GNE-201ENST00000377902 CAPN14A8MX76 684 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 TFAMQ00059 246 aaKnown RBP18.76■□□□□ 0.59
GNE-201ENST00000377902 C1orf228Q6PIY5 440 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 RIPOR1Q6ZS17 1223 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 CDR2LQ86X02 465 aaPredicted RBP18.76■□□□□ 0.59
GNE-201ENST00000377902 IQCGQ9H095 443 aaKnown RBP18.76■□□□□ 0.59
GNE-201ENST00000377902 SMYD2Q9NRG4 433 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 MEI4A8MW99 385 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 ATG7O95352 703 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms