RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 FSCN2O14926 492 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 ABL1P00519 1130 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 HAPLN1P10915 354 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-203ENST00000377344 NOP2P46087 812 aaKnown RBP13.64□□□□□ -0.23
CBWD3-203ENST00000377344 ADIGQ0VDE8 80 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 PTP4A2Q12974 167 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 GPRIN1Q7Z2K8 1008 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 TMEM110Q86TL2 294 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 REXO1L1PQ8IX06 675 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 SCUBE3Q8IX30 993 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 GPR152Q8TDT2 470 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 CTTNBP2NLQ9P2B4 639 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 RFXAPO00287 272 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 PJA2O43164 708 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 TGM5O43548 720 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 SEC24AO95486 1093 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 GABRB2P47870 512 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 TUFMP49411 452 aaKnown RBP13.64□□□□□ -0.23
CBWD3-203ENST00000377344 TKTL1P51854 596 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 RPL10AP62906 217 aaKnown RBP13.64□□□□□ -0.23
CBWD3-203ENST00000377344 PDE12Q6L8Q7 609 aaKnown RBP13.64□□□□□ -0.23
CBWD3-203ENST00000377344 DNAJC24Q6P3W2 148 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 XYLT1Q86Y38 959 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 STKLD1Q8NE28 680 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 KCTD13Q8WZ19 329 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 C8orf48Q96LL4 319 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 UBXN6Q9BZV1 441 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 PAXBP1Q9Y5B6 917 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 PTPRDP23468 1912 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 GOLGA6L9A6NEM1 432 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 HHLA1C9JL84 531 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 BUB1O43683 1085 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 GABBR2O75899 941 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 GLUD1P00367 558 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 ARHGAP25P42331 645 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 SLC5A3P53794 718 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 ZNF268Q14587 947 aaPredicted RBP13.63□□□□□ -0.23
CBWD3-203ENST00000377344 FAM102AQ5T9C2 384 aaPredicted RBP13.63□□□□□ -0.23
CBWD3-203ENST00000377344 FAM183BPQ6ZVS7 135 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 RBM23Q86U06 439 aaKnown RBP13.63□□□□□ -0.23
CBWD3-203ENST00000377344 SLC35G2Q8TBE7 412 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 GIPC2Q8TF65 315 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 RFFLQ8WZ73 363 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 SELENOOQ9BVL4 669 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 NUP85Q9BW27 656 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 MRPL47Q9HD33 250 aaKnown RBP13.63□□□□□ -0.23
CBWD3-203ENST00000377344 PNPLA8Q9NP80 782 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 OSGEPQ9NPF4 335 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 CYLDQ9NQC7 956 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 PARVAQ9NVD7 372 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 WDR35Q9P2L0 1181 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 SCINQ9Y6U3 715 aa13.63□□□□□ -0.23
CBWD3-203ENST00000377344 A0A1W2PPC1 479 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 PER2O15055 1255 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 PAPSS1O43252 624 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-203ENST00000377344 GJB6O95452 261 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 CYP1A2P05177 515 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 ALDH1A3P47895 512 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 LRIT3Q3SXY7 679 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 RAB41Q5JT25 222 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 RHOT2Q8IXI1 618 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 C3orf20Q8ND61 904 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 SCAMP5Q8TAC9 235 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 CLEC4CQ8WTT0 213 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 ULBP1Q9BZM6 244 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 LMAN2LQ9H0V9 348 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 ZNF576Q9H609 170 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 AVENQ9NQS1 362 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-203ENST00000377344 SALL4Q9UJQ4 1053 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 NCANO14594 1321 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 CDH23Q9H251 3354 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 GRAP2O75791 330 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 MOCS3O95396 460 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 USP17L7P0C7H9 530 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 ATF6P18850 670 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 RPL34P49207 117 aaKnown RBP13.62□□□□□ -0.23
CBWD3-203ENST00000377344 RNASE9P60153 205 aaKnown RBP13.62□□□□□ -0.23
CBWD3-203ENST00000377344 SLC6A3Q01959 620 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 MAMLD1Q13495 774 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 PTPROQ16827 1216 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 PLEKHA7Q6IQ23 1121 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 DCUN1D2Q6PH85 259 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 DENND5BQ6ZUT9 1274 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 ZDHHC17Q8IUH5 632 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 TCEAL8Q8IYN2 117 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 NUP93Q8N1F7 819 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 KREMEN2Q8NCW0 462 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 SLC7A14Q8TBB6 771 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 ZNF564Q8TBZ8 553 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-203ENST00000377344 NDRG1Q92597 394 aaKnown RBP13.62□□□□□ -0.23
CBWD3-203ENST00000377344 PIWIL1Q96J94 861 aaKnown RBP13.62□□□□□ -0.23
CBWD3-203ENST00000377344 MCEEQ96PE7 176 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 METTL5Q9NRN9 209 aaKnown RBP13.62□□□□□ -0.23
CBWD3-203ENST00000377344 KCND1Q9NSA2 647 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 UVRAGQ9P2Y5 699 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 HSFX1Q9UBD0 423 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 MAGED2Q9UNF1 606 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-203ENST00000377344 COG5Q9UP83 839 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 YIPF1Q9Y548 306 aa13.62□□□□□ -0.23
CBWD3-203ENST00000377344 A0A0A6YYK5 440 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms