RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 CLEC4FQ8N1N0 589 aa9.4□□□□□ -0.9
CRNKL1-201ENST00000377327 RBM15BQ8NDT2 890 aaKnown RBP9.4□□□□□ -0.9
CRNKL1-201ENST00000377327 TNIP2Q8NFZ5 429 aa9.4□□□□□ -0.9
CRNKL1-201ENST00000377327 CDRT15Q96T59 188 aa9.4□□□□□ -0.9
CRNKL1-201ENST00000377327 NMUR2Q9GZQ4 415 aa9.4□□□□□ -0.9
CRNKL1-201ENST00000377327 ZC4H2Q9NQZ6 224 aa9.4□□□□□ -0.9
CRNKL1-201ENST00000377327 DNAAF2Q9NVR5 837 aaKnown RBP9.4□□□□□ -0.9
CRNKL1-201ENST00000377327 UTP6Q9NYH9 597 aaKnown RBP9.4□□□□□ -0.9
CRNKL1-201ENST00000377327 KBTBD13C9JR72 458 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 ALOX15BO15296 676 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 ZC3H11AO75152 810 aaKnown RBP eCLIP9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 ALBP02768 609 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 CYP1A2P05177 515 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 CNTFP26441 200 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 ALDH1B1P30837 517 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 ARHGDIAP52565 204 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 MTTPP55157 894 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 ACAP1Q15027 740 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 FAM160B1Q5W0V3 765 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 RFWD3Q6PCD5 774 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 ZCCHC23Q6ZST2 131 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 PIWIL2Q8TC59 973 aaKnown RBP9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 EML4Q9HC35 981 aaKnown RBP9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 TCF7L2Q9NQB0 619 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 TAS2R1Q9NYW7 299 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 PTTG2Q9NZH5 202 aa9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 RSL24D1Q9UHA3 163 aaKnown RBP9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 R3HDM2Q9Y2K5 976 aaKnown RBP9.4□□□□□ -0.91
CRNKL1-201ENST00000377327 ZNF335Q9H4Z2 1342 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 WDR46O15213 610 aaKnown RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 POLBP06746 335 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 CPA3P15088 417 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 CCNFP41002 786 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 LPCAT4Q643R3 524 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 ALYREFQ86V81 257 aaKnown RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 KATNAL2Q8IYT4 538 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 USP13Q92995 863 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 EXT2Q93063 718 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 ATP6V1E2Q96A05 226 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 RIT2Q99578 217 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 COA1Q9GZY4 146 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 PARVBQ9HBI1 364 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 S100A14Q9HCY8 104 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 CYLDQ9NQC7 956 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 GABBR1Q9UBS5 961 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 SRP68Q9UHB9 627 aaKnown RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 WASF2Q9Y6W5 498 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 ATRNO75882 1429 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 DIP2BQ9P265 1576 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 TCRBV7S2A1N4TA0A589 114 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 ATP9BO43861 1147 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 PPATQ06203 517 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 KBTBD12Q3ZCT8 623 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 SEL1L3Q68CR1 1132 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 SV2AQ7L0J3 742 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 RNF148Q8N7C7 305 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 RMDN3Q96TC7 470 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 PREBQ9HCU5 417 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 C6orf203Q9P0P8 240 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 ZMYND8Q9ULU4 1186 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 SPATA31A3Q5VYP0 1347 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 TRMUO75648 421 aaKnown RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 NTSR2O95665 410 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 ASMTLO95671 621 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 SERPINA6P08185 405 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 ITGA2BP08514 1039 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 PAMP19021 973 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 TFE3P19532 575 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 CCND2P30279 289 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 CUL2Q13617 745 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 USP10Q14694 798 aaKnown RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 INAQ16352 499 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 FRA10AC1Q70Z53 315 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 HAS1Q92839 578 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 MED10Q9BTT4 135 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 POLR3FQ9H1D9 316 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 ACSS3Q9H6R3 686 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 PICK1Q9NRD5 415 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 DAPK2Q9UIK4 370 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 AP4B1Q9Y6B7 739 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 NID2Q14112 1375 aa9.39□□□□□ -0.91
CRNKL1-201ENST00000377327 SH3BP5O60239 455 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 C6orf222P0C671 652 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 CCDC159P0C7I6 412 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 MYL4P12829 197 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 TTKP33981 857 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 RAP1GDS1P52306 607 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 KCNQ4P56696 695 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 YWHAHQ04917 246 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 NPY5RQ15761 445 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 OLFML1Q6UWY5 402 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 DENND5BQ6ZUT9 1274 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 RNF135Q8IUD6 432 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 PLD3Q8IV08 490 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 ZNF555Q8NEP9 628 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 KAT5Q92993 513 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 VCPIP1Q96JH7 1222 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 NYAP2Q9P242 653 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms