RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 F8W810 466 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 TRUB2O95900 331 aaKnown RBP13.55□□□□□ -0.24
TRIM40-206ENST00000376724 CD48P09326 243 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 SDC4P31431 198 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 CDKN2BP42772 138 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 TUSC3Q13454 348 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 ACAP1Q15027 740 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 PAQR9Q6ZVX9 377 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 SLC24A5Q71RS6 500 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 LRRC8DQ7L1W4 858 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 PIGZQ86VD9 579 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRIM40-206ENST00000376724 NDRG1Q92597 394 aaKnown RBP13.55□□□□□ -0.24
TRIM40-206ENST00000376724 PEBP4Q96S96 227 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 DUSP16Q9BY84 665 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 HOMER3Q9NSC5 361 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 FRMPD3Q5JV73 1810 aa13.55□□□□□ -0.24
TRIM40-206ENST00000376724 MYBPHLA2RUH7 354 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 C3orf70A6NLC5 250 aaPredicted RBP13.54□□□□□ -0.24
TRIM40-206ENST00000376724 C9IYK1 514 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 XPO1O14980 1071 aaKnown RBP13.54□□□□□ -0.24
TRIM40-206ENST00000376724 PRPSAP2O60256 369 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 HSF2BPO75031 334 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 ODC1P11926 461 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 NPR3P17342 541 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 KDELR1P24390 212 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 ACADSBP45954 432 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 MAP3K7CLP57077 242 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 COPS2P61201 443 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 SLC20A2Q08357 652 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 ADIGQ0VDE8 80 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 CCNG2Q16589 344 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 GLB1LQ6UWU2 654 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 ZDHHC17Q8IUH5 632 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 ATL2Q8NHH9 583 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 FAM172AQ8WUF8 416 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 LINC01599Q8WXQ3 324 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 KRT82Q9NSB4 513 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 ASIC3Q9UHC3 531 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 AGPSO00116 658 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 DNM1LO00429 736 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 ITGB1P05556 798 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 FAM163BP0C2L3 166 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 SELPP16109 830 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 TFE3P19532 575 aaPredicted RBP13.54□□□□□ -0.24
TRIM40-206ENST00000376724 PCK1P35558 622 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 VPS41P49754 854 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 TERF2Q15554 542 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 GSTA5Q7RTV2 222 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 FBXO25Q8TCJ0 367 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 GRK7Q8WTQ7 553 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 PCED1BQ96HM7 432 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 RUFY1Q96T51 708 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 FMO2Q99518 471 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 CALN1Q9BXU9 219 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 RNF208Q9H0X6 261 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRIM40-206ENST00000376724 GRHL1Q9NZI5 618 aa13.54□□□□□ -0.24
TRIM40-206ENST00000376724 SAE1Q9UBE0 346 aaPredicted RBP13.54□□□□□ -0.24
TRIM40-206ENST00000376724 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.54□□□□□ -0.24
TRIM40-206ENST00000376724 TDRD15B5MCY1 1934 aaKnown RBP13.53□□□□□ -0.24
TRIM40-206ENST00000376724 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
TRIM40-206ENST00000376724 SYF2O95926 243 aaKnown RBP13.53□□□□□ -0.24
TRIM40-206ENST00000376724 GAS8O95995 478 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 FAM200BP0CF97 657 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 DESP17661 470 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 AARSP49588 968 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM40-206ENST00000376724 NDUFV1P49821 464 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 CDK7P50613 346 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
TRIM40-206ENST00000376724 DRG2P55039 364 aaKnown RBP13.53□□□□□ -0.24
TRIM40-206ENST00000376724 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
TRIM40-206ENST00000376724 CLLU1OSQ5K130 101 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 CFAP58Q5T655 872 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 CD300LGQ6UXG3 332 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 CLEC20AQ6ZU45 233 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 PRUNE1Q86TP1 453 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 METTL23Q86XA0 190 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 FAM126BQ8IXS8 530 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 FAM149B1Q96BN6 582 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 LRRC4Q9HBW1 653 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 ZDHHC18Q9NUE0 388 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 FEZ2Q9UHY8 353 aaPredicted RBP13.53□□□□□ -0.24
TRIM40-206ENST00000376724 DNPEPQ9ULA0 475 aa13.53□□□□□ -0.24
TRIM40-206ENST00000376724 DPYSL4O14531 572 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 LIASO43766 372 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 CST8O60676 142 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 NBNO60934 754 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 AP1G2O75843 785 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 DDHD2O94830 711 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 EOMESO95936 686 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 HSPA9P38646 679 aaKnown RBP13.52□□□□□ -0.24
TRIM40-206ENST00000376724 RPL34P49207 117 aaKnown RBP13.52□□□□□ -0.24
TRIM40-206ENST00000376724 GYS2P54840 703 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 CDH6P55285 790 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 PLCB3Q01970 1234 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms