RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.28■■□□□ 1.16
HLA-C-201ENST00000376228 ALG3Q92685 438 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 IGSF21Q96ID5 467 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 NAP1L3Q99457 506 aaPredicted RBP22.28■■□□□ 1.16
HLA-C-201ENST00000376228 PARD6BQ9BYG5 372 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 EHD2Q9NZN4 543 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 MUC3AQ02505 3323 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 H3BQ06 376 aaPredicted RBP22.27■■□□□ 1.16
HLA-C-201ENST00000376228 PODXLO00592 558 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 FSCN2O14926 492 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 CA8P35219 290 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 OR1G1P47890 313 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 C2orf54Q08AI8 447 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 PDCLQ13371 301 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 UPP1Q16831 310 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 PPP1R26Q5T8A7 1209 aaPredicted RBP22.27■■□□□ 1.16
HLA-C-201ENST00000376228 CCDC70Q6NSX1 233 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 LLGL2Q6P1M3 1020 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 COLGALT2Q8IYK4 626 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 ADGRF2Q8IZF7 708 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 PDCL2Q8N4E4 241 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 FNIP1Q8TF40 1166 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 PABPC5Q96DU9 382 aaKnown RBP22.27■■□□□ 1.16
HLA-C-201ENST00000376228 MCRS1Q96EZ8 462 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 TNIP3Q96KP6 325 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 CPXM1Q96SM3 734 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 COL25A1Q9BXS0 654 aaPredicted RBP22.27■■□□□ 1.16
HLA-C-201ENST00000376228 CACNG4Q9UBN1 327 aa22.27■■□□□ 1.16
HLA-C-201ENST00000376228 PRG3Q9Y2Y8 225 aaPredicted RBP22.27■■□□□ 1.16
HLA-C-201ENST00000376228 HIDE1A8MVS5 230 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 F8W810 466 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 CCDC188H7C350 402 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 CYB561D2O14569 222 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 NRP1O14786 923 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 TUSC3Q13454 348 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 WDR93Q6P2C0 686 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 TMC7Q7Z402 723 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 XYLT1Q86Y38 959 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 NIPA2Q8N8Q9 360 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 KRT35Q92764 455 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 SENP8Q96LD8 212 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 TRIM7Q9C029 511 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 CYLDQ9NQC7 956 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 ARGLU1Q9NWB6 273 aaPredicted RBP22.26■■□□□ 1.15
HLA-C-201ENST00000376228 FAN1Q9Y2M0 1017 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 CLCNKBP51801 687 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 RWDD2BP57060 319 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 SNX16P57768 344 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 DLX2Q07687 328 aaPredicted RBP22.26■■□□□ 1.15
HLA-C-201ENST00000376228 DSC1Q08554 894 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 BRD3Q15059 726 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 AAK1Q2M2I8 961 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 VPS52Q8N1B4 723 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 C12orf29Q8N999 325 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 SLC35F5Q8WV83 523 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 AUTS2Q8WXX7 1259 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 PPP2R3CQ969Q6 453 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 TMEM175Q9BSA9 504 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 VN1R3Q9BXE9 311 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 RBM12Q9NTZ6 932 aaKnown RBP22.26■■□□□ 1.15
HLA-C-201ENST00000376228 SMARCAL1Q9NZC9 954 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 HESX1Q9UBX0 185 aa22.26■■□□□ 1.15
HLA-C-201ENST00000376228 PSTPIP1O43586 416 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 ALDH2P05091 517 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 MCM3P25205 808 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 LTBRP36941 435 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 LHX1P48742 406 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 RPL34P49207 117 aaKnown RBP22.25■■□□□ 1.15
HLA-C-201ENST00000376228 RBM10P98175 930 aaKnown RBP22.25■■□□□ 1.15
HLA-C-201ENST00000376228 PIGHQ14442 188 aaPredicted RBP22.25■■□□□ 1.15
HLA-C-201ENST00000376228 COL19A1Q14993 1142 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 PPP2R5EQ16537 467 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 GOLGA7BQ2TAP0 167 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 FBXO38Q6PIJ6 1188 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 PHLDB2Q86SQ0 1253 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 ANKRD52Q8NB46 1076 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 IPO4Q8TEX9 1081 aaKnown RBP22.25■■□□□ 1.15
HLA-C-201ENST00000376228 SLC4A5Q9BY07 1137 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 TLE6Q9H808 572 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 MARCH5Q9NX47 278 aa22.25■■□□□ 1.15
HLA-C-201ENST00000376228 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.25■■□□□ 1.15
HLA-C-201ENST00000376228 CCDC151A5D8V7 595 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 DLL1O00548 723 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 TBX10O75333 385 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 ERBB2P04626 1255 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 RHOXF2BP0C7M4 288 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 LMO2P25791 158 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 PSMC1P62191 440 aaKnown RBP22.24■■□□□ 1.15
HLA-C-201ENST00000376228 RPL7AP62424 266 aaKnown RBP22.24■■□□□ 1.15
HLA-C-201ENST00000376228 CTC1Q2NKJ3 1217 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 LRRC38Q5VT99 294 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 DCUN1D2Q6PH85 259 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 MTERF4Q7Z6M4 381 aaKnown RBP22.24■■□□□ 1.15
HLA-C-201ENST00000376228 TMEM110Q86TL2 294 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 DDX53Q86TM3 631 aaKnown RBP22.24■■□□□ 1.15
HLA-C-201ENST00000376228 OSTM1Q86WC4 334 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 TTC30AQ86WT1 665 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 UBA3Q8TBC4 463 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 RHOXF2Q9BQY4 288 aa22.24■■□□□ 1.15
HLA-C-201ENST00000376228 ZBP1Q9H171 429 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms