RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 OGDHQ02218 1023 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 DSG1Q02413 1049 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 ZNF252P-AS1Q0IIN9 211 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 MESDQ14696 234 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 CFAP221Q4G0U5 840 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 MEI1Q5TIA1 1274 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 OR6B2Q6IFH4 312 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 GPRIN1Q7Z2K8 1008 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 PEX26Q7Z412 305 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 DDX53Q86TM3 631 aaKnown RBP11.01□□□□□ -0.65
PDPN-203ENST00000376061 NT5DC3Q86UY8 548 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 CPNE8Q86YQ8 564 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 TNS4Q8IZW8 715 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 JOSD2Q8TAC2 188 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 CLEC4CQ8WTT0 213 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 FUBP3Q96I24 572 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDPN-203ENST00000376061 RNPC3Q96LT9 517 aaKnown RBP11.01□□□□□ -0.65
PDPN-203ENST00000376061 PGLYRP2Q96PD5 576 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 KCNK16Q96T55 309 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 SELENOOQ9BVL4 669 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 TLR10Q9BXR5 811 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 ABI2Q9NYB9 513 aaPredicted RBP11.01□□□□□ -0.65
PDPN-203ENST00000376061 PACSIN2Q9UNF0 486 aaPredicted RBP11.01□□□□□ -0.65
PDPN-203ENST00000376061 PCDHB5Q9Y5E4 795 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 PCDHB12Q9Y5F1 795 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 BACE2Q9Y5Z0 518 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 ZNF638Q14966 1978 aaKnown RBP11□□□□□ -0.65
PDPN-203ENST00000376061 ATG2AQ2TAZ0 1938 aa11□□□□□ -0.65
PDPN-203ENST00000376061 MTMR11A4FU01 709 aa11□□□□□ -0.65
PDPN-203ENST00000376061 URI1O94763 535 aaPredicted RBP11□□□□□ -0.65
PDPN-203ENST00000376061 PROSCO94903 275 aa11□□□□□ -0.65
PDPN-203ENST00000376061 VNN2O95498 520 aa11□□□□□ -0.65
PDPN-203ENST00000376061 URODP06132 367 aa11□□□□□ -0.65
PDPN-203ENST00000376061 KRT3P12035 628 aa11□□□□□ -0.65
PDPN-203ENST00000376061 RPL17P18621 184 aaKnown RBP11□□□□□ -0.65
PDPN-203ENST00000376061 COMTP21964 271 aa11□□□□□ -0.65
PDPN-203ENST00000376061 CYP2F1P24903 491 aa11□□□□□ -0.65
PDPN-203ENST00000376061 MAN1A1P33908 653 aa11□□□□□ -0.65
PDPN-203ENST00000376061 RFC1P35251 1148 aaPredicted RBP11□□□□□ -0.65
PDPN-203ENST00000376061 SCNN1AP37088 669 aa11□□□□□ -0.65
PDPN-203ENST00000376061 ARPP19P56211 112 aa11□□□□□ -0.65
PDPN-203ENST00000376061 ROR1Q01973 937 aa11□□□□□ -0.65
PDPN-203ENST00000376061 ADCY1Q08828 1119 aa11□□□□□ -0.65
PDPN-203ENST00000376061 GPR17Q13304 367 aa11□□□□□ -0.65
PDPN-203ENST00000376061 SHHQ15465 462 aa11□□□□□ -0.65
PDPN-203ENST00000376061 PAPD7Q5XG87 772 aaKnown RBP11□□□□□ -0.65
PDPN-203ENST00000376061 FAM109BQ6ICB4 259 aaPredicted RBP11□□□□□ -0.65
PDPN-203ENST00000376061 SLC8B1Q6J4K2 584 aa11□□□□□ -0.65
PDPN-203ENST00000376061 KIAA1841Q6NSI8 718 aa11□□□□□ -0.65
PDPN-203ENST00000376061 TRNP1Q6NT89 227 aa11□□□□□ -0.65
PDPN-203ENST00000376061 DCUN1D2Q6PH85 259 aa11□□□□□ -0.65
PDPN-203ENST00000376061 ZDHHC17Q8IUH5 632 aa11□□□□□ -0.65
PDPN-203ENST00000376061 SCUBE3Q8IX30 993 aa11□□□□□ -0.65
PDPN-203ENST00000376061 VPS52Q8N1B4 723 aa11□□□□□ -0.65
PDPN-203ENST00000376061 TTC9BQ8N6N2 239 aa11□□□□□ -0.65
PDPN-203ENST00000376061 FBXO22Q8NEZ5 403 aa11□□□□□ -0.65
PDPN-203ENST00000376061 UBXN6Q9BZV1 441 aa11□□□□□ -0.65
PDPN-203ENST00000376061 ZBP1Q9H171 429 aa11□□□□□ -0.65
PDPN-203ENST00000376061 LRRC4Q9HBW1 653 aa11□□□□□ -0.65
PDPN-203ENST00000376061 PNPLA8Q9NP80 782 aa11□□□□□ -0.65
PDPN-203ENST00000376061 TMEM59LQ9UK28 342 aa11□□□□□ -0.65
PDPN-203ENST00000376061 SNX12Q9UMY4 172 aa11□□□□□ -0.65
PDPN-203ENST00000376061 CDY1Q9Y6F8 540 aa11□□□□□ -0.65
PDPN-203ENST00000376061 CHD9Q3L8U1 2897 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 WDR27A2RRH5 827 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 LINC01553A4QN01 128 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 F8VP50 259 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 MYO1FO00160 1098 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 C2CD2LO14523 706 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 ARHGEF15O94989 841 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 CTNNB1P35222 781 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 MAGEA11P43364 429 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 TKTL1P51854 596 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 SLC6A3Q01959 620 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 TAF5Q15542 800 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 RAB41Q5JT25 222 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 VSTM1Q6UX27 236 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 RNF19BQ6ZMZ0 732 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 SLC26A9Q7LBE3 791 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 SIX6OS1Q8N1H7 587 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 EMC1Q8N766 993 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 KLHL23Q8NBE8 558 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 ATAD1Q8NBU5 361 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 FNIP1Q8TF40 1166 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 C2orf15Q8WU43 125 aaKnown RBP10.99□□□□□ -0.65
PDPN-203ENST00000376061 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDPN-203ENST00000376061 CD101Q93033 1021 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 HES6Q96HZ4 224 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 ULBP1Q9BZM6 244 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 CRISPLD1Q9H336 500 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 IP6K2Q9UHH9 426 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 AMFRQ9UKV5 643 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 ALG6Q9Y672 507 aa10.99□□□□□ -0.65
PDPN-203ENST00000376061 CHD7Q9P2D1 2997 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 C2CD4BA6NLJ0 364 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 GRXCR1A8MXD5 290 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 DDX3YO15523 660 aaKnown RBP10.98□□□□□ -0.65
PDPN-203ENST00000376061 SPOPO43791 374 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 GRAP2O75791 330 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 MYOGP15173 224 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms