RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 DAB1O75553 588 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 TRUB2O95900 331 aaKnown RBP11.67□□□□□ -0.54
PDPN-202ENST00000376057 ADORA2BP29275 332 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 DNA2P51530 1060 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 ARSEP51690 589 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 ZNF211Q13398 564 aaPredicted RBP11.67□□□□□ -0.54
PDPN-202ENST00000376057 CCDC14Q49A88 953 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 BOLA3Q53S33 107 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 STRADAQ7RTN6 431 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 PIGZQ86VD9 579 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 RXFP2Q8WXD0 754 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 PCED1BQ96HM7 432 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 FUBP3Q96I24 572 aaKnown RBP eCLIP11.67□□□□□ -0.54
PDPN-202ENST00000376057 FAM53CQ9NYF3 392 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 LRFN2Q9ULH4 789 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 GJB6O95452 261 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 PDGFRAP16234 1089 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 FGFR3P22607 806 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 CTCFP49711 727 aaPredicted RBP11.66□□□□□ -0.54
PDPN-202ENST00000376057 MRPS5P82675 430 aaKnown RBP11.66□□□□□ -0.54
PDPN-202ENST00000376057 ADCY1Q08828 1119 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 IKBKEQ14164 716 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 CCNG2Q16589 344 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 PM20D1Q6GTS8 502 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 TRNP1Q6NT89 227 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 C4orf50Q6ZRC1 276 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 ABI1Q8IZP0 508 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 VWCEQ96DN2 955 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 CEP295NLQ96MC4 621 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 TRIM62Q9BVG3 475 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 EPC1Q9H2F5 836 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 NRDE2Q9H7Z3 1164 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 ST7Q9NRC1 585 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 MYBPHLA2RUH7 354 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 OR6C75A6NL08 312 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 MDM4O15151 490 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 RAD51CO43502 376 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 B4GALT3O60512 393 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 TIMP1P01033 207 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 ALDH2P05091 517 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 RARAP10276 462 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 MATKP42679 507 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 PTGIRP43119 386 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 BRCC3P46736 316 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 AIF1P55008 147 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 RBM10P98175 930 aaKnown RBP11.66□□□□□ -0.54
PDPN-202ENST00000376057 TSPY1Q01534 308 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 YWHAHQ04917 246 aaPredicted RBP11.66□□□□□ -0.54
PDPN-202ENST00000376057 PDK2Q15119 407 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 PTPROQ16827 1216 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 TFDP3Q5H9I0 405 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 SPOCD1Q6ZMY3 1216 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 DCP1BQ8IZD4 617 aaKnown RBP11.66□□□□□ -0.54
PDPN-202ENST00000376057 ZDHHC14Q8IZN3 488 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 LRRC43Q8N309 656 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 AENQ8WTP8 325 aaKnown RBP11.66□□□□□ -0.54
PDPN-202ENST00000376057 CAVIN3Q969G5 261 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 PGAP3Q96FM1 320 aaPredicted RBP11.66□□□□□ -0.54
PDPN-202ENST00000376057 SMOQ99835 787 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 LPIN3Q9BQK8 851 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 AP1M1Q9BXS5 423 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 OSBPL8Q9BZF1 889 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 RAB17Q9H0T7 212 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 DMGDHQ9UI17 866 aaKnown RBP11.66□□□□□ -0.54
PDPN-202ENST00000376057 ADAM28Q9UKQ2 775 aa11.66□□□□□ -0.54
PDPN-202ENST00000376057 TJP3O95049 919 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 SDC4P31431 198 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 COILP38432 576 aaPredicted RBP11.65□□□□□ -0.54
PDPN-202ENST00000376057 CDKN2BP42772 138 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 MAGEA11P43364 429 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 RNASELQ05823 741 aaKnown RBP11.65□□□□□ -0.54
PDPN-202ENST00000376057 EMBQ6PCB8 327 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 CYP4V2Q6ZWL3 525 aaPredicted RBP11.65□□□□□ -0.54
PDPN-202ENST00000376057 SCUBE3Q8IX30 993 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 C2orf15Q8WU43 125 aaKnown RBP11.65□□□□□ -0.54
PDPN-202ENST00000376057 VIPAS39Q9H9C1 493 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 ZNF446Q9NWS9 450 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 COMMD8Q9NX08 183 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 USP18Q9UMW8 372 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 DRG1Q9Y295 367 aaKnown RBP11.65□□□□□ -0.54
PDPN-202ENST00000376057 USP3Q9Y6I4 520 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 hCG_1818297A0A087WSY0 165 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 NRP1O14786 923 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 TBC1D4O60343 1298 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 ACAT1P24752 427 aaKnown RBP11.65□□□□□ -0.54
PDPN-202ENST00000376057 MIPP30301 263 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 RGS7P49802 495 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 ZMIZ2Q8NF64 920 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 GRK7Q8WTQ7 553 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 HDAC7Q8WUI4 952 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 SLC9A7Q96T83 725 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 MED10Q9BTT4 135 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 FAM114A2Q9NRY5 505 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 KRT82Q9NSB4 513 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.65□□□□□ -0.54
PDPN-202ENST00000376057 CACNG4Q9UBN1 327 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 NR2E1Q9Y466 385 aa11.65□□□□□ -0.54
PDPN-202ENST00000376057 MAP2K7O14733 419 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 AP1G2O75843 785 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 DGKIO75912 1065 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms