RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 ZXDBP98169 803 aa16.9■□□□□ 0.3
C11orf88-202ENST00000375618 MYL5Q02045 173 aa16.9■□□□□ 0.3
C11orf88-202ENST00000375618 EXOC3L4Q17RC7 722 aa16.9■□□□□ 0.3
C11orf88-202ENST00000375618 GOLGA7BQ2TAP0 167 aa16.9■□□□□ 0.3
C11orf88-202ENST00000375618 DHX40Q8IX18 779 aaKnown RBP16.9■□□□□ 0.3
C11orf88-202ENST00000375618 AOPEPQ8N6M6 819 aa16.9■□□□□ 0.3
C11orf88-202ENST00000375618 ARL14EPQ8N8R7 260 aaPredicted RBP16.9■□□□□ 0.3
C11orf88-202ENST00000375618 MRPS31Q92665 395 aaKnown RBP16.9■□□□□ 0.3
C11orf88-202ENST00000375618 TRPC7Q9HCX4 862 aa16.9■□□□□ 0.3
C11orf88-202ENST00000375618 GMIPQ9P107 970 aa16.9■□□□□ 0.3
C11orf88-202ENST00000375618 FAM92AA1XBS5 289 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 CD19P15391 556 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 BRD2P25440 801 aaKnown RBP16.89■□□□□ 0.29
C11orf88-202ENST00000375618 YWHAQP27348 245 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 WEE1P30291 646 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 PKDCCQ504Y2 493 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 APTXQ7Z2E3 356 aaKnown RBP16.89■□□□□ 0.29
C11orf88-202ENST00000375618 FBXO32Q969P5 355 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 RNF38Q9H0F5 515 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 VPS16Q9H269 839 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 ACP6Q9NPH0 428 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 APEX2Q9UBZ4 518 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 CHORDC1Q9UHD1 332 aaPredicted RBP16.89■□□□□ 0.29
C11orf88-202ENST00000375618 TSPAN16Q9UKR8 245 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 CA14Q9ULX7 337 aa16.89■□□□□ 0.29
C11orf88-202ENST00000375618 SHISA7A6NL88 538 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 PRR33A8MZF0 331 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 ARNTLO00327 626 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 GABBR2O75899 941 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 RTN3O95197 1032 aaPredicted RBP16.88■□□□□ 0.29
C11orf88-202ENST00000375618 PAEPP09466 180 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 ZDHHC11BP0C7U3 371 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 PNMA6AP0CW24 399 aaPredicted RBP16.88■□□□□ 0.29
C11orf88-202ENST00000375618 VDRP11473 427 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 ATP1A3P13637 1013 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 DDX6P26196 483 aaKnown RBP eCLIP16.88■□□□□ 0.29
C11orf88-202ENST00000375618 KLK7P49862 253 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 PDE4CQ08493 712 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 SGO2Q562F6 1265 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 MFSD6LQ8IWD5 586 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 ANKRD52Q8NB46 1076 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 UBA3Q8TBC4 463 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 ZFYVE19Q96K21 471 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 OSER1Q9NX31 292 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 TRPM5Q9NZQ8 1165 aa16.88■□□□□ 0.29
C11orf88-202ENST00000375618 LIMA1Q9UHB6 759 aaKnown RBP16.88■□□□□ 0.29
C11orf88-202ENST00000375618 KIF26AQ9ULI4 1882 aaPredicted RBP16.87■□□□□ 0.29
C11orf88-202ENST00000375618 CYP26A1O43174 497 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 OLFM2O95897 454 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 OAS1P00973 400 aaKnown RBP16.87■□□□□ 0.29
C11orf88-202ENST00000375618 PSMC3P17980 439 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 GDI1P31150 447 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 KIF11P52732 1056 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 COPB1P53618 953 aaKnown RBP16.87■□□□□ 0.29
C11orf88-202ENST00000375618 FCHO2Q0JRZ9 810 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 IQCB1Q15051 598 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 ARHGAP44Q17R89 818 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 CWF19L1Q69YN2 538 aaKnown RBP16.87■□□□□ 0.29
C11orf88-202ENST00000375618 BMP8AQ7Z5Y6 402 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 PIGZQ86VD9 579 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 SIX5Q8N196 739 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 SHC3Q92529 594 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 BPIFA3Q9BQP9 254 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 TRMT61BQ9BVS5 477 aaKnown RBP16.87■□□□□ 0.29
C11orf88-202ENST00000375618 NMUR1Q9HB89 426 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 PNPLA8Q9NP80 782 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 WNT16Q9UBV4 365 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 DNAJC12Q9UKB3 198 aa16.87■□□□□ 0.29
C11orf88-202ENST00000375618 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.87■□□□□ 0.29
C11orf88-202ENST00000375618 TRAV19A0A0A6YYK7 116 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 SOBPA7XYQ1 873 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 PES1O00541 588 aaKnown RBP16.86■□□□□ 0.29
C11orf88-202ENST00000375618 ABL1P00519 1130 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 KRT5P13647 590 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 TRIM21P19474 475 aaKnown RBP16.86■□□□□ 0.29
C11orf88-202ENST00000375618 AVPR1AP37288 418 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 VCPP55072 806 aaKnown RBP16.86■□□□□ 0.29
C11orf88-202ENST00000375618 MFAP3P55082 362 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 LCLAT1Q6UWP7 414 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 BHLHA9Q7RTU4 235 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 SCD5Q86SK9 330 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 CELF5Q8N6W0 485 aaKnown RBP16.86■□□□□ 0.29
C11orf88-202ENST00000375618 DEPDC1BQ8WUY9 529 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 NDRG1Q92597 394 aaKnown RBP16.86■□□□□ 0.29
C11orf88-202ENST00000375618 SLITRK1Q96PX8 696 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 LSM14BQ9BX40 385 aaKnown RBP16.86■□□□□ 0.29
C11orf88-202ENST00000375618 CCSER2Q9H7U1 834 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 TDP1Q9NUW8 608 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 COMMD8Q9NX08 183 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 OBP2AQ9NY56 170 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 EHD2Q9NZN4 543 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 FBXL21Q9UKT6 434 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 SCML2Q9UQR0 700 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 FHOD1Q9Y613 1164 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 USP3Q9Y6I4 520 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 MYH10P35580 1976 aa16.86■□□□□ 0.29
C11orf88-202ENST00000375618 MYO16Q9Y6X6 1858 aa16.85■□□□□ 0.29
C11orf88-202ENST00000375618 EPHB6O15197 1021 aa16.85■□□□□ 0.29
C11orf88-202ENST00000375618 COCHO43405 550 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms