RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PID1Q7Z2X4 250 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 DHDDSQ86SQ9 333 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 SERPINA6P08185 405 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 ST3GAL1Q11201 340 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 UBE2SQ16763 222 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 MTERF2Q49AM1 385 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 TLK2Q86UE8 772 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 TTC30BQ8N4P2 665 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 AP3S1Q92572 193 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 PTCD3Q96EY7 689 aaKnown RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 DHX35Q9H5Z1 703 aaKnown RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 CYTH3O43739 400 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 FESP07332 822 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 MSH3P20585 1137 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 CRKP46108 304 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 SDE2Q6IQ49 451 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 BORCS5Q969J3 196 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 NSUN4Q96CB9 384 aaKnown RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 C9orf72Q96LT7 481 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 GCNAQ96QF7 691 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 VPS45Q9NRW7 570 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 UBAP1Q9NZ09 502 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 USP17L5A8MUK1 530 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 NMT2O60551 498 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 PAEPP09466 180 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 RALAP11233 206 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 SCNN1DP51172 638 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 TMEM79Q9BSE2 394 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 NT5C1AQ9BXI3 368 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 UNC45AQ9H3U1 944 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 CACNA2D2Q9NY47 1150 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 ADAM28Q9UKQ2 775 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 USP17L8P0C7I0 530 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 RRM2P31350 389 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 OR6Y1Q8NGX8 325 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 CPNE1Q99829 537 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 TRIM8Q9BZR9 551 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 CAPN15O75808 1086 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 PDGFRAP16234 1089 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF543Q08ER8 600 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 RWDD4Q6NW29 188 aaKnown RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 ANGPTL8Q6UXH0 198 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 HDDC2Q7Z4H3 204 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 PLEKHA8Q96JA3 519 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 TLR10Q9BXR5 811 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 PRMT7Q9NVM4 692 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 A0A087X0T9 212 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 MYMKA6NI61 221 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 SASH3O75995 380 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 FAM228BP0C875 321 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 CA8P35219 290 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 SLC12A1Q13621 1099 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 SHCBP1Q8NEM2 672 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 CYP3A43Q9HB55 503 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 MTMR4Q9NYA4 1195 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 DMGDHQ9UI17 866 aaKnown RBP10.53□□□□□ -0.72
PTCH1-204ENST00000375290 ROBO3Q96MS0 1386 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 VWDEQ8N2E2 1590 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 HLA-DPA1P20036 260 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 GRPEL2Q8TAA5 225 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 EGFL8Q99944 293 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 SEC31BQ9NQW1 1179 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 H2AFY2Q9P0M6 372 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-204ENST00000375290 CORO2BQ9UQ03 480 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF263O14978 683 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 GLI1P08151 1106 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 AKT1P31749 480 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 NNMTP40261 264 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 NCOA4Q13772 614 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 C19orf18Q8NEA5 215 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 TTC16Q8NEE8 873 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 SELENONQ9NZV5 590 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 C2CD2Q9Y426 696 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 PIWIL2Q8TC59 973 aaKnown RBP10.53□□□□□ -0.72
PTCH1-204ENST00000375290 ORAI2Q96SN7 254 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 POLR3FQ9H1D9 316 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-204ENST00000375290 FBXO21O94952 628 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 ARMC4Q5T2S8 1044 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 GLMNQ92990 594 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 MAF1Q9H063 256 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 KLHL25Q9H0H3 589 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 AASDHPPTQ9NRN7 309 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 DENND1BQ6P3S1 775 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 KATNAL2Q8IYT4 538 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 EID3Q8N140 333 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 AP5M1Q9H0R1 490 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 MINPP1Q9UNW1 487 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 NAALADL1Q9UQQ1 740 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 STX11O75558 287 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 ENPEPQ07075 957 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 QRICH1Q2TAL8 776 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 PDPK2PQ6A1A2 396 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 CIAPIN1Q6FI81 312 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 PRR23BQ6ZRT6 265 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 EPS8L3Q8TE67 593 aaKnown RBP10.53□□□□□ -0.72
PTCH1-204ENST00000375290 LRRC19Q9H756 370 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 SLC9A1P19634 815 aa10.53□□□□□ -0.72
PTCH1-204ENST00000375290 JAK1P23458 1154 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms