RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CCND1P24385 295 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 VAV2P52735 878 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 ADKP55263 362 aaKnown RBP5.48□□□□□ -1.53
PMS1-202ENST00000374826 ZNF280AP59817 542 aaPredicted RBP5.48□□□□□ -1.53
PMS1-202ENST00000374826 ODF1Q14990 250 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 GADL1Q6ZQY3 521 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 WDR63Q8IWG1 891 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 CLPTM1LQ96KA5 538 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 AIFM2Q9BRQ8 373 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 PACSIN1Q9BY11 444 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 SLC29A3Q9BZD2 475 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 ASPSCR1Q9BZE9 553 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 KLK15Q9H2R5 256 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 UNKLQ9H9P5 680 aaKnown RBP5.48□□□□□ -1.53
PMS1-202ENST00000374826 NARFQ9UHQ1 456 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 SERPINB13Q9UIV8 391 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 C10orf71Q711Q0 1435 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 CARMIL3Q8ND23 1372 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 PSME4Q14997 1843 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 CAMTA2O94983 1202 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 CD1AP06126 327 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 HOXB7P09629 217 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 TLE1Q04724 770 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 EXOSC9Q06265 439 aaKnown RBP5.47□□□□□ -1.53
PMS1-202ENST00000374826 DDR1Q08345 913 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 AIMP1Q12904 312 aaKnown RBP5.47□□□□□ -1.53
PMS1-202ENST00000374826 GEN1Q17RS7 908 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 TWISTNBQ3B726 338 aaPredicted RBP5.47□□□□□ -1.53
PMS1-202ENST00000374826 UTP14CQ5TAP6 766 aaKnown RBP5.47□□□□□ -1.53
PMS1-202ENST00000374826 TBC1D9BQ66K14 1250 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.47□□□□□ -1.53
PMS1-202ENST00000374826 KIF6Q6ZMV9 814 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 COLGALT2Q8IYK4 626 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 SH2D3CQ8N5H7 860 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 IL17RDQ8NFM7 739 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 TLR10Q9BXR5 811 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 MYH16Q9H6N6 1097 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 CALCOCO1Q9P1Z2 691 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 SPEF1Q9Y4P9 236 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 PCDHB1Q9Y5F3 818 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 LRRC37AA6NMS7 1700 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 ATP10DQ9P241 1426 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 MAP3K15Q6ZN16 1313 aa5.47□□□□□ -1.53
PMS1-202ENST00000374826 PXDNLA1KZ92 1463 aa5.46□□□□□ -1.53
PMS1-202ENST00000374826 CGB1A6NKQ9 187 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 GPTP24298 496 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 HLFQ16534 295 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 Q8NA96 180 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 ACTRT2Q8TDY3 377 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 NSUN6Q8TEA1 469 aaKnown RBP5.46□□□□□ -1.54
PMS1-202ENST00000374826 PTCD3Q96EY7 689 aaKnown RBP5.46□□□□□ -1.54
PMS1-202ENST00000374826 DMRTA2Q96SC8 542 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 KMT5AQ9NQR1 393 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 DDX21Q9NR30 783 aaKnown RBP eCLIP5.46□□□□□ -1.54
PMS1-202ENST00000374826 HOMER2Q9NSB8 354 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 JKAMPQ9P055 326 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 DMTF1Q9Y222 760 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 CDYLQ9Y232 598 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 CFAP20Q9Y6A4 193 aaKnown RBP5.46□□□□□ -1.54
PMS1-202ENST00000374826 COL4A1P02462 1669 aa5.46□□□□□ -1.54
PMS1-202ENST00000374826 ABCC12Q96J65 1359 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 POLRMTO00411 1230 aaKnown RBP5.45□□□□□ -1.54
PMS1-202ENST00000374826 SLC43A1O75387 559 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 ZRANB2O95218 330 aaKnown RBP eCLIP5.45□□□□□ -1.545e-9■□□□□ 10.7
PMS1-202ENST00000374826 SRSF4Q08170 494 aaKnown RBP5.45□□□□□ -1.54
PMS1-202ENST00000374826 FLYWCH1Q4VC44 716 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 CCDC30Q5VVM6 783 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 ZNF365Q70YC5 407 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 COPS6Q7L5N1 327 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 TTC7BQ86TV6 843 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 MIER2Q8N344 545 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 LNX2Q8N448 690 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 SSH3Q8TE77 659 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 KLHL32Q96NJ5 620 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 STK31Q9BXU1 1019 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 MAN1C1Q9NR34 630 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 ARPP21Q9UBL0 812 aaPredicted RBP5.45□□□□□ -1.54
PMS1-202ENST00000374826 DBF4Q9UBU7 674 aaPredicted RBP5.45□□□□□ -1.54
PMS1-202ENST00000374826 NIP7Q9Y221 180 aaKnown RBP eCLIP5.45□□□□□ -1.54
PMS1-202ENST00000374826 ZBED9Q6R2W3 1325 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 UBN2Q6ZU65 1347 aa5.45□□□□□ -1.54
PMS1-202ENST00000374826 ADCY9O60503 1353 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 TRGV11A0A075B6L2 103 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 NPHP1O15259 732 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 SERPINB2P05120 415 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 KCNA2P16389 499 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 TM4SF1P30408 202 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 ZNF844Q08AG5 666 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 LTBP1Q14766 1721 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 PTPROQ16827 1216 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 KHDC1Q4VXA5 237 aaKnown RBP5.44□□□□□ -1.54
PMS1-202ENST00000374826 G2E3Q7L622 706 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 C1QL2Q7Z5L3 287 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 AOPEPQ8N6M6 819 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 VRK1Q99986 396 aaPredicted RBP5.44□□□□□ -1.54
PMS1-202ENST00000374826 SYT17Q9BSW7 474 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 C1QTNF7Q9BXJ2 289 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 IL17RBQ9NRM6 502 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 HYPKQ9NX55 129 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 KCTD5Q9NXV2 234 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms