RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 PMF1Q6P1K2 205 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 BBS12Q6ZW61 710 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 CLEC4CQ8WTT0 213 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 NDRG1Q92597 394 aaKnown RBP17.84■□□□□ 0.45
RXRB-201ENST00000374680 FAF2Q96CS3 445 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 KLK14Q9P0G3 267 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 HAO1Q9UJM8 370 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 C2orf71A6NGG8 1288 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 PRPSAP2O60256 369 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 LGR5O75473 907 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 TCEA3O75764 348 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 OAS1P00973 400 aaKnown RBP17.83■□□□□ 0.45
RXRB-201ENST00000374680 GBP2P32456 591 aaPredicted RBP17.83■□□□□ 0.45
RXRB-201ENST00000374680 YARSP54577 528 aaKnown RBP17.83■□□□□ 0.45
RXRB-201ENST00000374680 DPYSL3Q14195 570 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 GOLGA7BQ2TAP0 167 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 PDIK1LQ8N165 341 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 ANKLE1Q8NAG6 615 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 CCHCR1Q8TD31 782 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 TCP10LQ8TDR4 215 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 C18orf25Q96B23 403 aaPredicted RBP17.83■□□□□ 0.45
RXRB-201ENST00000374680 MRPL45Q9BRJ2 306 aaKnown RBP17.83■□□□□ 0.45
RXRB-201ENST00000374680 MYLK2Q9H1R3 596 aa17.83■□□□□ 0.45
RXRB-201ENST00000374680 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.83■□□□□ 0.45
RXRB-201ENST00000374680 HMGCRP04035 888 aa17.83■□□□□ 0.44
RXRB-201ENST00000374680 NQO1P15559 274 aaKnown RBP17.83■□□□□ 0.44
RXRB-201ENST00000374680 GEMIN4P57678 1058 aaKnown RBP17.83■□□□□ 0.44
RXRB-201ENST00000374680 TAP1Q03518 808 aa17.83■□□□□ 0.44
RXRB-201ENST00000374680 MTFR1Q15390 333 aa17.83■□□□□ 0.44
RXRB-201ENST00000374680 MPHOSPH6Q99547 160 aaKnown RBP17.83■□□□□ 0.44
RXRB-201ENST00000374680 SNTG2Q9NY99 539 aa17.83■□□□□ 0.44
RXRB-201ENST00000374680 PSMC3IPQ9P2W1 217 aaPredicted RBP17.83■□□□□ 0.44
RXRB-201ENST00000374680 CDH5P33151 784 aaPredicted RBP17.82■□□□□ 0.44
RXRB-201ENST00000374680 CCDC142Q17RM4 750 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 NAT8LQ8N9F0 302 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 CCDC110Q8TBZ0 833 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 TTC25Q96NG3 672 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 SETD4Q9NVD3 440 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 EIF4E1BA6NMX2 242 aaKnown RBP17.82■□□□□ 0.44
RXRB-201ENST00000374680 KBTBD13C9JR72 458 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 CBX6O95503 412 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 APRTP07741 180 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 AKAP5P24588 427 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 RBL1P28749 1068 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 ADORA2BP29275 332 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 KBTBD12Q3ZCT8 623 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 PRPF39Q86UA1 669 aaKnown RBP17.82■□□□□ 0.44
RXRB-201ENST00000374680 OR6B3Q8NGW1 331 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 TTC17Q96AE7 1141 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 STAMBPL1Q96FJ0 436 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 ACAP3Q96P50 834 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 BCO2Q9BYV7 579 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 CDHR5Q9HBB8 845 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 UBN1Q9NPG3 1134 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 PRMT7Q9NVM4 692 aaPredicted RBP17.82■□□□□ 0.44
RXRB-201ENST00000374680 SHOC2Q9UQ13 582 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 FARP1Q9Y4F1 1045 aaPredicted RBP17.82■□□□□ 0.44
RXRB-201ENST00000374680 NPTXRO95502 500 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 GPD1P21695 349 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 ROR1Q01973 937 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 DRICH1Q6PGQ1 229 aaPredicted RBP17.82■□□□□ 0.44
RXRB-201ENST00000374680 ANKRD13AQ8IZ07 590 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 PPM1NQ8N819 430 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 CDCA5Q96FF9 252 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 ASNSD1Q9NWL6 643 aa17.82■□□□□ 0.44
RXRB-201ENST00000374680 MYO18AQ92614 2054 aaKnown RBP17.81■□□□□ 0.44
RXRB-201ENST00000374680 A0A0G2JND7 137 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 LCP1P13796 627 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 RABGGTBP53611 331 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 IRX4P78413 519 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 FAAP100Q0VG06 881 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 BSPRYQ5W0U4 402 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 LRRC6Q86X45 466 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 NIPA2Q8N8Q9 360 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 ATP11CQ8NB49 1132 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 CEP41Q9BYV8 373 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 LHX5Q9H2C1 402 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 DPEP3Q9H4B8 488 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 IKBKGQ9Y6K9 419 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 SLC25A27O95847 323 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 YY1P25490 414 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 ARHGAP1Q07960 439 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 BNIP1Q12981 228 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 ZNF268Q14587 947 aaPredicted RBP17.81■□□□□ 0.44
RXRB-201ENST00000374680 PPP1R2P3Q6NXS1 205 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 KCNV2Q8TDN2 545 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 DENND1AQ8TEH3 1009 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 FAM172AQ8WUF8 416 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 ZNF75CPQ92670 426 aaPredicted RBP17.81■□□□□ 0.44
RXRB-201ENST00000374680 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
RXRB-201ENST00000374680 ADARB2Q9NS39 739 aaKnown RBP17.81■□□□□ 0.44
RXRB-201ENST00000374680 PPP2R3BQ9Y5P8 575 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 MAD1L1Q9Y6D9 718 aa17.81■□□□□ 0.44
RXRB-201ENST00000374680 MGAMO43451 1857 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 UGT1A9O60656 530 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 IL18RAPO95256 599 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 ABHD2P08910 425 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 ADORA2AP29274 412 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 GRM1Q13255 1194 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 PRAMEF19Q5SWL8 479 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms