RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ACRP10323 421 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 RAG1P15918 1043 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 FGFR3P22607 806 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 SCNN1AP37088 669 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 ACADSBP45954 432 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 MRPS25P82663 173 aaKnown RBP16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 SIX1Q15475 284 aaPredicted RBP16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 CCDC14Q49A88 953 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 RAB41Q5JT25 222 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 VARS2Q5ST30 1063 aaKnown RBP16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 LRRC38Q5VT99 294 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 CYP4V2Q6ZWL3 525 aaPredicted RBP16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 SLC26A9Q7LBE3 791 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 KATNAL2Q8IYT4 538 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 THEM5Q8N1Q8 247 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 HDAC7Q8WUI4 952 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 RHOXF2Q9BQY4 288 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 LRRC1Q9BTT6 524 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 C11orf84Q9BUA3 381 aaPredicted RBP16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 ARHGEF37A1IGU5 675 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 GPD1P21695 349 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 WDR5P61964 334 aaKnown RBP16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 TUBB4BP68371 445 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 ADIGQ0VDE8 80 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 C15orf59Q2T9L4 293 aaPredicted RBP16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 FAM171A1Q5VUB5 890 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 FUT10Q6P4F1 479 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 ARCQ7LC44 396 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 TAS1R1Q7RTX1 841 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 SMARCD1Q96GM5 515 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 COLEC11Q9BWP8 271 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 VN1R3Q9BXE9 311 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 PARD6BQ9BYG5 372 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 UBXN6Q9BZV1 441 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 ZCWPW1Q9H0M4 648 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 TRAPPC3O43617 180 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 TBC1D4O60343 1298 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 H2AFXP16104 143 aaPredicted RBP16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 TFE3P19532 575 aaPredicted RBP16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 BDNFP23560 247 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 LONRF2Q1L5Z9 754 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 RSPO2Q6UXX9 243 aaPredicted RBP16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 BHLHA9Q7RTU4 235 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 SLC13A5Q86YT5 568 aaPredicted RBP16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 RNF168Q8IYW5 571 aaPredicted RBP16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 CFAP57Q96MR6 1250 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 PEBP4Q96S96 227 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 CNPY3Q9BT09 278 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 KLHL11Q9NVR0 708 aa16.48■□□□□ 0.23
NIPAL3-204ENST00000374399 PDGFRAP16234 1089 aa16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 TKTL1P51854 596 aa16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 SNX16P57768 344 aa16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 TSPY1Q01534 308 aa16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 ACAP1Q15027 740 aa16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 LLGL1Q15334 1064 aa16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 RTP2Q5QGT7 225 aa16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 ADAT2Q7Z6V5 191 aaKnown RBP16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 EXD1Q8NHP7 514 aa16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 ACSF2Q96CM8 615 aaPredicted RBP16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 DMGDHQ9UI17 866 aaKnown RBP16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 RAB21Q9UL25 225 aa16.47■□□□□ 0.23
NIPAL3-204ENST00000374399 KIAA1671Q9BY89 1806 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 C3orf70A6NLC5 250 aaPredicted RBP16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 KRIT1O00522 736 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 FSCN2O14926 492 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 FYNP06241 537 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 MIPP30301 263 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 GJC1P36383 396 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 MRPS5P82675 430 aaKnown RBP16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 SEL1L2Q5TEA6 688 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 FBXO38Q6PIJ6 1188 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 HFE2Q6ZVN8 426 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 TMEM199Q8N511 208 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 PRELID2Q8N945 189 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 RAPGEF5Q92565 580 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 KRT12Q99456 494 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 DDX47Q9H0S4 455 aaKnown RBP16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 CALCOCO1Q9P1Z2 691 aa16.46■□□□□ 0.23
NIPAL3-204ENST00000374399 SF3B1O75533 1304 aaKnown RBP eCLIP16.46■□□□□ 0.239e-6■■■■■ 87.9
NIPAL3-204ENST00000374399 TRUB2O95900 331 aaKnown RBP16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 RARAP10276 462 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 PCK1P35558 622 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 SSR1P43307 286 aaKnown RBP16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 SLC8A3P57103 927 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 ADCY2Q08462 1091 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 KLF1Q13351 362 aaPredicted RBP16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 SLC39A12Q504Y0 691 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 OTUD1Q5VV17 481 aaPredicted RBP16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 POLNQ7Z5Q5 900 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 CENPIQ92674 756 aaPredicted RBP16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 SLITRK1Q96PX8 696 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 DDX23Q9BUQ8 820 aaKnown RBP16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 ULBP1Q9BZM6 244 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 IL23AQ9NPF7 189 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 ASNSD1Q9NWL6 643 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 PI4K2BG5E9Z4 385 aa16.45■□□□□ 0.22
NIPAL3-204ENST00000374399 ZRANB2O95218 330 aaKnown RBP eCLIP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms