RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 NCK2O43639 380 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 GLI1P08151 1106 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 LCP1P13796 627 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 CPB1P15086 417 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 COMTP21964 271 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 BDNFP23560 247 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 CTNNA1P35221 906 aaKnown RBP10.19□□□□□ -0.78
PTPN20-202ENST00000374339 RFC1P35251 1148 aaPredicted RBP10.19□□□□□ -0.78
PTPN20-202ENST00000374339 MAGEA11P43364 429 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 GLUD2P49448 558 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 EPHB4P54760 987 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 RPL7AP62424 266 aaKnown RBP10.19□□□□□ -0.78
PTPN20-202ENST00000374339 TUBB4BP68371 445 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 CREMQ03060 361 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 ADIGQ0VDE8 80 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 GPR17Q13304 367 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 CCDC142Q17RM4 750 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 RAB41Q5JT25 222 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 RTP2Q5QGT7 225 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 CCDC181Q5TID7 509 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 LLGL2Q6P1M3 1020 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 SLC26A9Q7LBE3 791 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 LRRTM3Q86VH5 581 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 TMEM173Q86WV6 379 aaPredicted RBP10.19□□□□□ -0.78
PTPN20-202ENST00000374339 RNF168Q8IYW5 571 aaPredicted RBP10.19□□□□□ -0.78
PTPN20-202ENST00000374339 CEP112Q8N8E3 955 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 SPPL2BQ8TCT7 592 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 BCL7CQ8WUZ0 217 aaPredicted RBP10.19□□□□□ -0.78
PTPN20-202ENST00000374339 CLP1Q92989 425 aaKnown RBP10.19□□□□□ -0.78
PTPN20-202ENST00000374339 BTBD6Q96KE9 485 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 TMEM209Q96SK2 561 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 SMOQ99835 787 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 TRIM62Q9BVG3 475 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 HERC2P3Q9BVR0 1158 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 GOLPH3Q9H4A6 298 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 CNGB3Q9NQW8 809 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 CHST7Q9NS84 486 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 TJP2Q9UDY2 1190 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 ZMYND8Q9ULU4 1186 aaPredicted RBP10.19□□□□□ -0.78
PTPN20-202ENST00000374339 SSX2IPQ9Y2D8 614 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 RWDD3Q9Y3V2 267 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 BACE2Q9Y5Z0 518 aa10.19□□□□□ -0.78
PTPN20-202ENST00000374339 KCNK3O14649 394 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 RIOK3O14730 519 aaKnown RBP10.18□□□□□ -0.78
PTPN20-202ENST00000374339 PAPSS1O43252 624 aaPredicted RBP10.18□□□□□ -0.78
PTPN20-202ENST00000374339 PSTPIP1O43586 416 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 TLL1O43897 1013 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 TBC1D4O60343 1298 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 HSF2BPO75031 334 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 RNF8O76064 485 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 BEST1O76090 585 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 SLU7O95391 586 aaKnown RBP10.18□□□□□ -0.78
PTPN20-202ENST00000374339 URODP06132 367 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 PDGFRAP16234 1089 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 GPD1P21695 349 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 PSMA2P25787 234 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 CTNNA2P26232 953 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 GRIK1P39086 918 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 PAFAH1B1P43034 410 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 TKTL1P51854 596 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 ZNF143P52747 638 aaPredicted RBP10.18□□□□□ -0.78
PTPN20-202ENST00000374339 DSG1Q02413 1049 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 PSMD5Q16401 504 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 LRRC38Q5VT99 294 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 SLC8B1Q6J4K2 584 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 RHOT1Q8IXI2 618 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 SCML4Q8N228 414 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 RIN2Q8WYP3 895 aaPredicted RBP10.18□□□□□ -0.78
PTPN20-202ENST00000374339 IRGQQ8WZA9 623 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 GOLGA1Q92805 767 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 CD101Q93033 1021 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 RPGRIP1Q96KN7 1286 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 B3GALT6Q96L58 329 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 C8orf48Q96LL4 319 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 CEP295NLQ96MC4 621 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 KCNK16Q96T55 309 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 NAP1L3Q99457 506 aaPredicted RBP10.18□□□□□ -0.78
PTPN20-202ENST00000374339 CNPY3Q9BT09 278 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 TRIM7Q9C029 511 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 CARD9Q9H257 536 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 TMLHEQ9NVH6 421 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 ASNSD1Q9NWL6 643 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 ABI2Q9NYB9 513 aaPredicted RBP10.18□□□□□ -0.78
PTPN20-202ENST00000374339 CXXC1Q9P0U4 656 aaPredicted RBP10.18□□□□□ -0.78
PTPN20-202ENST00000374339 MTRRQ9UBK8 725 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 TMEM59LQ9UK28 342 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 PACSIN2Q9UNF0 486 aaPredicted RBP10.18□□□□□ -0.78
PTPN20-202ENST00000374339 PCDHA3Q9Y5H8 950 aa10.18□□□□□ -0.78
PTPN20-202ENST00000374339 CCDC85CA6NKD9 419 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 C2CD4BA6NLJ0 364 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 HHLA1C9JL84 531 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 PIK3R2O00459 728 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 ZBED1O96006 694 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 OR4Q2P0C623 313 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 CYP2F1P24903 491 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 SDC4P31431 198 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 CXCR5P32302 372 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 TERF1P54274 439 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 RWDD2BP57060 319 aa10.17□□□□□ -0.78
PTPN20-202ENST00000374339 RNASE9P60153 205 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms